#WARNING:no index is registered index "YP_009725310.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725310.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 6 (A) | polymer(polypeptide(L)) [348 aa] | Replicase polyprotein 1ab :R1AB_CVMA5 | |
2 | b | A 5 (A) | polymer(polypeptide(L)) [348 aa] | Replicase polyprotein 1ab :R1AB_CVMA5 | 9V(L) 10V 11N 12K(A) 13G 14H 27I 30T(K) 35V(I) 37G(N) 38V(E) 39D 41E(V) 42L(V) 44E(K) 61R 88Y 162L 163N 165V 166T(V) 167L(V) 168I(V) 169G 170E(D) (identity: 48.0 %/49.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2gti_A_6 identity=49.0% |
queryA 1:SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDYKRDAPAHISTIG: 100 :***** * ** ***** ** * * * * ** * * * * *** ** *** * * ** * ** * * *** * ** : 2gti_A_6 2:SLENVVYNLVNAGHFDGRAGELPCAVIGEKVIAKIQNEDVVVFKNNTPFPTNVAVELFAKRSIRPHPELKLFRNLNIDVCWSHVLWDYAKDSVFCSSTYK: 101 SecStr : HHHHHHHHHHHSS EEEETTEEEEEETTEEEEEEE SSS HHHHHHHHHTB S B HHHHHHTT EESS B EETTTTEESSS BSS: ExpBur :eeebbbebbeeeeeeeeeeeebeeeeeeeebbbeeeeeeeeebebebebebebbbbbbbebbeebbbbbbbbbbbebebbbebbbbbeeeebbbbeebbe: Contact : bbbbbb b b b bbb bb b b b queryA 101:VCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQASLNGVTL--IGEA-VKTQFNYYKKVDGVV-----------: 186 :** ** * * **** * * **** * * * ** * **** * * * * * * : 2gti_A_6 102:VCKYTDLQ------CIESLNVLFDGRDNGALEAFKKCRNGVYINTTKIKSLSUIKGPQRADLNGVVVEKVGDSDVEFWFAVRKDGDDVIFSRTGSLEPSH: 195 SecStr :S TTTB S------ TTS EEEETTSTTHHHHHHH SSEEEEESS TTS EE S EEETTEEESEETTEE EEEEEETTEE SSS SS : ExpBur :bbeebeee------ebeeebbbbbeeeeebeeebeebebbbbbbeeebeebebbebbebbbeeeeebeeeeeeebebbbbbbeeeeeeeeeeeeeeeeee: Contact : bb bbb bbbb queryA 187:--------------------QQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFSHSQLGGLHLLIGLAKRFKESPFELE: 266 : * ***** * * *** * ** * * ** * * ***** *** * ********** * * : 2gti_A_6 196:XXXXXXXXXXXXXXXXXXXXXXARGTIFTQSRLLSSFTPRSEUEKDFUDLDDDVFIAKYSLQDYAFEHVVYGSFNQKIIGGLHLLIGLARRQQKSNLVIQ: 295 SecStr :---------------------- S B GGG SHHHHHHHHS HHHHHHHTT GGG HHHHTT B SSSB B BHHHHHHHTTTS EEEE: ExpBur :----------------------eebebbbbbbeeeebeeeeebbebbbeeeeeebbeeeebeeeebeebbbbebeeeebbbbbbbbbbbebeeebebeee: queryA 267:DFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETF: 341 : * ** * *** **** ** ********** * ** * ***** * * * *** * **: 2gti_A_6 296:EFVTYDSSIHSYLITDENSGSSKSVCTVIDLLLDDFVDIVKSLNLKCVSKVVNVNVDFKDFQFULWCNEEKVUTF: 370 SecStr :ESS S SEEEEEEEETTTTEEEEEEEEE HHHHHHHHTT SSS EEEEETTEEEEEEEETTEEEE : ExpBur :eeeeeebbbbebebebeeeebebeebbbbbbbbeebbebbeebeeeeeeeebebbbbbebbebebeeeebebeee: |