#WARNING:no index is registered index "YP_009725310.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725310.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 5 (A) | polymer(polypeptide(L)) [348 aa] | Replicase polyprotein 1ab :R1AB_CVMA5 | |
2 | b | A 2 (A) | polymer(polypeptide(L)) [348 aa] | Replicase polyprotein 1ab :R1AB_CVMA5 | 78D 107I(L) 108A(Q) 115I(C) 117A(E) 118P(S) 119L 138R (identity: 37.5 %/49.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2gth_A_5 identity=49.3% |
queryA 1:SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDYKRDAPAHISTIG: 100 :***** * ** ***** ** * * * * ** * * * * *** ** *** * * ** * ** * * *** * ** : 2gth_A_5 2:SLENVVYNLVNAGHFDGRAGELPCAVIGEKVIAKIQNEDVVVFKNNTPFPTNVAVELFAKRSIRPHPELKLFRNLNIDVCWSHVLWDYAKDSVFCSSTYK: 101 SecStr : HHHHHHHHHHTSS EEEETTEEEEEETTEEEEEEE SSS HHHHHHHHHTB S B HHHHHHTT EEBT B EETTTTEESSS BBS: ExpBur :eeebbbebbeeeeeeeeeeeebeeeeeeeebbbeeeeeeeeebebebebebebbbbbbbebbeebbbbbbbbbbbebebbbebbbbbeeeebbbbeebbe: Contact : b queryA 101:VCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQASLNGVTL--IGEA-VKTQFNYYKKVDGVV-----------: 186 :** ** * * **** * * **** * * * ** * **** * * * * * * : 2gth_A_5 102:VCKYTDLQ------CIESLNVLFDGRDNGALEAFKKCRNGVYINTTKIKSLSMIKGPQRADLNGVVVEKVGDSDVEFWFAVRKDGDDVIFSRTGSLEPSH: 195 SecStr :S TTTB S------ SSSEEEEETTSTTHHHHHTT SEEEEEESS TTS EE S EEETTEEESBSSSSB EEEEEETTEE SSS SS : ExpBur :bbeebeee------ebeeebbbbbeebeebeeebeebebbbbbbeeeeeebebbebbebbbeeeeebeeeeeeebebbbbbbeeeeeeeeeeeeeeeeee: Contact : bb b bbb b queryA 187:--------------------QQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFSHSQLGGLHLLIGLAKRFKESPFELE: 266 : * ***** * * *** ** ** * * ** * * ***** *** * ********** * * : 2gth_A_5 196:XXXXXXXXXXXXXXXXXXXXXXARGTIFTQSRLLSSFTPRSEMEKDFMDLDDDVFIAKYSLQDYAFEHVVYGSFNQKIIGGLHLLIGLARRQQKSNLVIQ: 295 SecStr :---------------------- S B GGG SHHHHHHHHS HHHHHHHTT TTS HHHHHH B SSSB B BHHHHHHHHTTS EEEE: ExpBur :----------------------eebebbbbbbebeebeeebebbebbbeeeeeebbeeeebeeeebeebbbbebeeeebbbbbbbbbbbebeeebebeee: queryA 267:DFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETF: 341 : * ** ***** **** ** ********** * ** * ***** * * ***** * **: 2gth_A_5 296:EFVTYDSSIHSYFITDENSGSSKSVCTVIDLLLDDFVDIVKSLNLKCVSKVVNVNVDFKDFQFMLWCNEEKVMTF: 370 SecStr : SS S SEEEEEEEETTT EEEEEEEE HHHHHHHHHH SSSEEEEEEETTEEEEEEE SS EEE : ExpBur :eeeeebbbbbebebebeeeebebeebbbbbbbbeebbebbeebeeeeeeeebebbbbbebbebbbeeeebebeee: |