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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS2) | B 1 (B) | polymer(polypeptide(L)) [305 aa] | 3C-like proteinase :R1AB_SARS2 | |
2 | b | F 1 (B) | non-polymer(B1S) | (1R,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid | 3304H 3312M 3403F 3404L 3405N 3407S 3408C 3426H 3427H 3428M 3429E 3435H 3450D 3452Q (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7cb7_B_1 identity=100.0% |
queryA 3264:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK:3363 :****************************************************************************************************: 7cb7_B_1 6:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 105 SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG TTGGGS HHHHHHT GGG EEEETTEEE EEEEEEETTEEEEEESS TT E: ExpBur :eebeeeebebeebeebbbbbbbeebebbbbbbeebbbbbbbbbbeeeebeebebeebbeeeeeeebebbeeeeebebeeeeeeebbbebebeeebeeebe: Contact : b b queryA 3364:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI:3463 :****************************************************************************************************: 7cb7_B_1 106:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 205 SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B S TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS SSSS B : ExpBur :eeeeebeebebbbbbbbbebeeeeebbbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebeb: Contact : bbb bb bbbb b b b queryA 3464:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC:3563 :****************************************************************************************************: 7cb7_B_1 206:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 305 SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS S HHHHHHHH: ExpBur :bbbbbbbbbbbbeeeeeebeeeeebeeeebbebbeeeebeebeeeeeeebeebbeebeeebeebbbbbeebbeeebeeeebbeeeeeebbbbbebbebee: queryA 3564:SGVTF:3568 :*****: 7cb7_B_1 306:SGVTF: 310 SecStr :HT : ExpBur :eeeee: |