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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS2) | A 1 (A) | polymer(polypeptide(L)) [313 aa] | Papain-like protease :R1A_SARS2 | |
2 | b | L 1 (A) | non-polymer(ACT) | ACETATE ION | 1669W 1672N 1673N 1674C(S) 1725L 1834G 1835H (identity: 85.7 %/99.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7jir_A_1 identity=99.7% |
queryA 1565:VRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGL:1664 :****************************************************************************************************: 7jir_A_1 5:VRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGL: 104 SecStr : EEEEEEESSSSS EEEEEETTS HHHHHSSEEETTEE TTS GGGTT EEEE SHHHHHHHHHHHS TTHHHHHHHHHHHHTTS EETTE: ExpBur :eeebebebbbbeeeeeeeebebeebbeeebeebbbebeebbeeebeeebeeeebbbeeeeeebeebbeebbeeeeeebbbebbebbeebeebebeebeeb: queryA 1665:TSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKG:1764 :********* ******************************************************************************************: 7jir_A_1 105:TSIKWADNNSYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKG: 204 SecStr :E S TTTHHHHHHHHHHTTS BSSHHHHHHHHHHHTT HHHHHHHHHHTT TT HHHHHHHHHHTB TT EEEEEEEETTTEEEEEEEET: ExpBur :bbbeeeeebbbbbbbbbbbbbbebebebebbbebbeebeeeebbebbbbbbbbbebeeeeebebeebbeebbeebebeebebbbbeebeeeeeeeeeeeb: Contact : b bbb b queryA 1765:VEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPIT:1864 :****************************************************************************************************: 7jir_A_1 205:VEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPIT: 304 SecStr :HHHHEEES S HHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEEETTS SEEEEEESSTTTSEEEEEEESSSEEEEETTEEEEESEEEEEEE: ExpBur :eebbbeeebbebeebbebbebebeeeeebeebbbebebebbbbbbeeeeeebeeeebbbbbbbeeeeeeeebebbbbeebbbbbebeeeeeeeebebebb: Contact : bb queryA 1865:DVFYKENSYTTTI:1877 :*************: 7jir_A_1 305:DVFYKENSYTTTI: 317 SecStr :EEEEE SEEE : ExpBur :bbbbebeeeebee: |