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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS2) | A 1 (A) | polymer(polypeptide(L)) [315 aa] | Papain-like protease nsp3 :R1A_SARS2 | |
2 | b | F 1 (A) | non-polymer(A4O) | N-(2,4-dihydroxybenzylidene)-thiosemicarbazone | 1622P 1628R 1631A 1632F 1637T 1638T 1639D 1640P 1642F 1643L (identity: 100.0 %/99.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7qcj_A_1 identity=99.7% |
queryA 1564:EVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNG:1663 :****************************************************************************************************: 7qcj_A_1 1:EVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNG: 100 SecStr : EEEEEEESSSSS EEEEEETTS HHHHHSSEEETTEE TT GGGTT EEEE SHHHHHHHHHHHS TTHHHHHHHHHHHHTTS EETT: ExpBur :eeeebebbbbbbeeeebeeebebeeebeeebeebbeebeebbeeebeeebeeebbbbeeeeeebeebbeebbeeeeeebbbbbbebbeebeebebeebee: Contact : b b bb bbbb bb queryA 1664:LTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLK:1763 :********** *****************************************************************************************: 7qcj_A_1 101:LTSIKWADNNUYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLK: 200 SecStr :EE TTTHHHHHHHHHHTTS BSSHHHHHHHHHHHTT HHHHHHHHHHTT TT HHHHHHHHHHTB TT EEEEEEEETTTEEEEEEEE: ExpBur :bbbbeeeeebbbbbbbbbbbbbbebebebebbeebbeebeebebbbbbbbbbbbbeeeeeeebebeebbbebbeebebeebebbbbeebeeeeeeeeeee: queryA 1764:GVEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPI:1863 :****************************************************************************************************: 7qcj_A_1 201:GVEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPI: 300 SecStr :THHHHEEES S HHHHHH EEEE TTS EEEEEEEEEESSEEEEEEEEEEEEEETTS SEEEEEEE SS EEEEEEEESSSEEEEETTEEEEESEEEEEE: ExpBur :bbebbbbeebbbbeebbebbeeeeeeeeebebbbbebebebbbbbbeeeeeebeeeebbbbbbbeeeeeebebebbbbeeebbbbbbeeeeeeeebebbb: queryA 1864:TDVFYKENSYTTTIK:1878 :***************: 7qcj_A_1 301:TDVFYKENSYTTTIK: 315 SecStr :EEEEEE SEEE : ExpBur :bbbbbebeebebeee: |