CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS2) | A 1 (A) | polymer(polypeptide(L)) [307 aa] | Papain-like protease nsp3 :R1A_SARS2 | |
2 | b | B 1 (A) | non-polymer(XYI) | 5-[2-(dimethylamino)ethoxy]-2-methyl-N-[(1R)-1-{(3M,5P)-3-(1-methyl-1H-pyrazol-4-yl)-5-[1-(propan-2-yl)-1H-pyrazol-4-yl]phenyl}ethyl]benzamide | 1725L 1726G 1727D 1729R 1730E 1771M 1810P 1811P 1827Y 1829G 1830N 1831Y 1832Q 1836Y 1864T (identity: 100.0 %/99.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8uuh_A_1 identity=99.4% |
queryA 1570:VFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKW:1669 :********************************************* ******************************************************: 8uuh_A_1 10:VFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEXKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKW: 109 SecStr : EEESSSSS EE SSS HHHHHSSEEETTEE SSS STT - EEEE SHHHHHHHHHHHS TTHHHHHHHHHHHHTTS EETTEE S: ExpBur :eebbbbeeeeeeeeeeeeeebeeebeebbeebeebbeebbeeebe-eebbbeeeeeebeebbeebbeeeeeebbbebbebbeebeebebeebeebbbbee: queryA 1670:ADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVM:1769 :****************************************************************************************************: 8uuh_A_1 110:ADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVM: 209 SecStr : SSTHHHHHHHHHHTTS BSSHHHHHHHHHHHTT HHHHHHHHHHTT TT HHHHHHHHHTTB TT EEEEEEEETTTEEEEEEEEGGGGSE: ExpBur :eeebbbbbbbbbbbbbbebebebebbbebbeebeebebbebbbbbbbbbeeeeeeebebeebbeebbeebebeebebbbbeebeeeeeeeeeeebeebbb: Contact : bbb bb queryA 1770:YMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDVFYK:1869 :********************* ******************************************************************************: 8uuh_A_1 210:YMGTLSYEQFKKGVQIPCTCGXQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDVFYK: 309 SecStr :EES S HHHHHH EEE S - EEEEEEEEESSEEEEEEEEEEEEE TTS SEEEEEEESSSSEEEEEEEESSSEEEEETTEEEEES EEEEEEEEEEE: ExpBur :beebbbbeebbebbeeebeee-ebebbbbebebebbbbbbeeeeeebeeeebbbbbbbeeeeeeeebebbbbeebbbbbebeeeeeeeebebbbbbbbbe: Contact : b bb b bbbb b b queryA 1870:ENSYTTTIK:1878 :*********: 8uuh_A_1 310:ENSYTTTIK: 318 SecStr : S EE : ExpBur :beeeebeee: |