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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(IMA1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [421 aa] | KARYOPHERIN ALPHA :IMA1_YEAST | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [19 aa] | NUCLEOPLASMIN :NUPL_XENLA | 108K(H) 110P 142W 146N 148A 149S 150G 151T 181Q 184W 188N 191G 192D 231W 235N 238R 240K 266E 273W 277Y 311T 315R 321V 322T 323G 324T(N) 328T 350N 354E 357W 360S 361N 364A 396E 399W 403N (identity: 94.4 %/49.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1ee5_A_1 identity=49.6% |
queryA 81:IVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISE: 180 : ** ** ** * **** **** * ** * * * * * ************ *** *** * * ** ** *: 1ee5_A_1 6:MTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKE: 105 SecStr :HHHHHSSS HHHHHHHHHHHHHHHS SS HHHHHHTT HHHHHGGGSTTS HHHHHHHHHHHHHHHTS HHHHHHHHHTT HHHHHHHHHHS HHHHH: ExpBur :eeeebeeeeeebbeebbebbbeebeeeeeeebeebeeeebbebbbebbeeebeeebbbbbbebbbebbeeeeebbeebbeeebbebbbebbeebeeebee: Contact : b b b b bbbb queryA 181:QAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTD: 280 :** ***** *** ** * * * * * * * ********* * * * * * **** * * * * * ******* *: 1ee5_A_1 106:QAIWALGNVAGDSTDYRDYVLQCNAMEPILGLF-----NSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSD: 200 SecStr :HHHHHHHHHHTT HHHHHHHHHTT HHHHHHGG-----GS HHHHHHHHHHHHHHH SSS HHHHGGGHHHHHHHTT S HHHHHHHHHHHHHHTT: ExpBur :bbbebbbbbbeeeeebbbebbebebbebbbebb-----eeebeebbebbbebbbbbbeeeeeebeeeebeebbeebbebbeeeeeebbbbbbebbbebbe: Contact :b b b bb b b b b b b b queryA 281:GPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVP: 380 :** * * * ** ** ****** ****** * ****** ** * ** ** ** *** ** ****** *** * * *: 1ee5_A_1 201:GPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIP: 300 SecStr :S HHHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT SSHHHHHHHHHHHHTTTTS HHHHHHHHHTT HH: ExpBur :eeeebbeebbeeebbebbbebbebeeeebbebbbebbbbbbebeeebbeebbebebbebbeebbebeeeebbebbbbbbbebbeeeeebbeebbebebbe: Contact : b b bbbb b b b b bb b queryA 381:FLVSVLSKADFKTQKEAVWAVTNYTSGGTV--EQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSI-----MIEECGGLDKI: 473 : ** * * ** *** ** * *** * *** * * ** ** * ** * *** ** * * * * ** ** **: 1ee5_A_1 301:PLVKLLEVAEDKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKI: 400 SecStr :HHHHHHHSS HHHHHHHHHHHHHHHGGGGT THHHHHHHHTT HHHHHTTTTSS HHHHHHHHHHHHHHHHHHHHHHHHTT SS HHHHHHHHTTHHHHH: ExpBur :ebbbbbeeeeeebeebbbebbbebbebbeeeeebbeebbeeebbebbbebbebeeeebbbbbbebbbebbebbeebeeeeeeeebebbeebeebebeebb: Contact : b b b queryA 474:EALQNHENESVYKASLSLIEKYF: 496 : * ** * ** **: 1ee5_A_1 401:FNCQQNENDKIYEKAYKIIETYF: 423 SecStr :HHGGG S HHHHHHHHHHHHHH : ExpBur :eebeeeeeeebbebbeebbeebb: |