[pdbjlvh2]Protein Model on 6uua_D_1_M

Protein Model on 6uua_D_1_M_1 (TEMPLATE: 6uua )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query F)
1	a	F	D 1 (DDD)	polymer(polypeptide(L)) [1362 aa]	DNA-directed RNA polymerase subunit beta' :RPOC_ECOLI
2	b		M 1 (DDD)	non-polymer(CTP)	CYTIDINE-5'-TRIPHOSPHATE	425R 427P 458N 460D 462D 932M 936H 937I

FOCUSED TEMPLATE

MODEL[1] TEMPLATE:6uua_D_1

6uua_D_1       1:XXXXXXXXXXXXXXEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRE: 100
SecStr          :--------------   S EE     HHHHHHHEEEE      B SSS SB TT TT HHHH  SSTTB SSSSSBGGGGTT B SSS  B   GGGGGT:    
ExpBur          :--------------eeeeeeeeebebbeebeeebeeebeeeeeeeeeeeebeeebbbbbebbbbeeebebbeeebeeeeeeeeebeebebebbeeebbee:    

6uua_D_1     101:RMGHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQILTEEQYLDALEEFGDEFDAKMGAEAIQALLKSMDLEQECEQ: 200
SecStr          : EEEEEEEEEEE GGGTTSSS SHHHHHT  HHHHHHHHTTSEEEEEEESSTTS TT EEEHHHHHHHHHTT SSEEEE SHHHHHHHHHH  TTHHHHH:    
ExpBur          :bebbbebebbbbbbbbbebeebbbbebbebeeeebbebbebebbbbbebeeeebeeeeebeeeeeeebeeeebeebebebbbebbbebbeebebeeebee:    

6uua_D_1     201:LREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ: 300
SecStr          :HHHHHSSS  SHHHHHHHHHHHHHHHHHHHT  GGGGEEEEEEE  GGGS EEE TTS EEE HHHHHHHHHHHHHHHHHHHHHHT  HHHHHHHHHHHH:    
ExpBur          :beeebeeeeeeeeeeebbebbebbeebeeeebebbebbbebbebebbeebebeeeeeeeeeeebbbebbeebbebbeebeebeeeeeeeeebbebbebbb:    

6uua_D_1     301:EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKM: 400
SecStr          :HHHHHHH TTTSSS  B TTSSB   SGGGGSSTTSHHHHTTSS   SSEEEEEEEE TTS TTEEEEEHHHHHHHSSHHHHHHHHHHTS SSHHHHHHH:    
ExpBur          :ebbbbbbbbeeeeebbeeeeeeebebebebeeeeebebeeeeeeeeeeeeeebebeebeebebeebbbbeebbbebbbeebbeebeeeeebeeeeebeeb:    

6uua_D_1     401:VEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPII: 500
SecStr          :HHTT HHHHHHHHHHHTT  EEEEESS  SGGGEEEEEEEEESSS EEE GGGHHHHT  TTT EEEEE   SHHHHHHHHHTSBTTT  B SSSSSBS :    
ExpBur          :beeeeeebbebbeebbeebbbbbbbeeebbebbebbbebebbeeeebebbbbbbebbebeeeebebbbebbeeeebbeebeeeebbbebbbbbbeeebeb:    
Contact         :                        b b                              b b b                                      

6uua_D_1     501:VPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERLYRSGLASLHARVKVRITEYEKDANGELVAKTSLKDTTVGRAILWMIVPKGLPYSIVNQALGKKA: 600
SecStr          :   THHHHHHHHHH   SS SS S EESSHHHHHHHHHHTS  TT EEEEEEEEEEE SSS EEEEEEEEEEEHHHHHHHTTS TTS GGGTSS   HHH:    
ExpBur          :bbeeebbbbbbebbbebbbeeeeeeebebbebbeebbeeeebebbbebebebebeeeeeeeeeeeeeeebebbbbbbbbbebbeebbebebbeeebbeeb:    

6uua_D_1     601:ISKMLNTCYRILGLKPTVIFADQIMYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAEVAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDN: 700
SecStr          :HHHHHHHHHHHT SHHHHHHHHHHHHHHHHHHHHHT    SSSS   TTHHHHHHHHHHHHHHHHHHHHHTSS HHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :beebbeebbbeeeeeebbebbbebbebbeebbeeeeeeeeeeebbbbeebeebbeebeeebeebeeeeeeeebeeeebebebbebbeebbeebbebbbee:    

6uua_D_1     701:LQTETVINRDGQEEKQVSFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRL: 800
SecStr          :HTT      TTS        HHHHHHHTTSS  HHHHHHHTS  B BB SSS B SS B   TTT   HHHHHHHHHHHHHHHHHHHSTHHHHHHHHHHH:    
ExpBur          :beeeeeebeeeeeeebebebebbbebebebeeeeeebbbebbbbbbbbeeeeebbeebbebbeeeebeeebeebbeebeebeeeebeeebeebeebbebb:    

6uua_D_1     801:VDVAQDLVVTEDDCGTHEGIMMTPVIEGGDVKEPLRDRVLGRVTAEDVLKPGTADILVPRNTLLHEQWCDLLEENSVDAVKVRSVVSCDTDFGVCAHCYG: 900
SecStr          :HHHTSS  EEES       EEE  B  SSS SB HHHHTSS  BSS    SSSSS  S SS    HHHHHHHHHHT   EEE  STT   SSSEEHHHH :    
ExpBur          :bbbbbebbbeeeebebeebbebeebeeebeeebebeebbebbbbbeebeeeeeeeeebeeeebbbeeebeebeebebeebbbbbbbbbebbebbbbebbb:    

6uua_D_1     901:RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKLSNVKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYG:1000
SecStr          :EETTTTEE  TT  HHHHHHHHHHHHHHHTTTSTTTS  B        EEEE S EEEEEES  EEE SSS EEE  SSEEEEEE SSS EEEEEEE TT:    
ExpBur          :bbbbebeebeebbbbbbbbbbbbbbbbbbebeeebeeebebeeeeeeeebebeeebebebeeeeeeebeeeeebbbbeebebebbeeeeeeebebebebb:    
Contact         :                               b   bb                                                               

6uua_D_1    1001:AVLAKGDGEQVAGGETVANWDPHTMPVITEVSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKIVDAQGNDVLIPGTDMPAQYF:1100
SecStr          : EESS TT EE TTEEEEE  TT EEEE SS EEEEEES  BTTTEEEE  STT   EEEE  TTS  STTSS   EEEEE SSS B B TTSS B EEE:    
ExpBur          :bebeebeeeebeeeeebbebeebbebbbbebebebeebebeeeebbeeeeeeeeeebebbbbeeeebeeebeeeebbbbbbeeebeeeebeebeeebebe:    

6uua_D_1    1101:LPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPRVADLFEARRPKEPAILAEISGIVSFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFE:1200
SecStr          :  TT EE S SS EE TT EEEEE     S  TTTTTHHHHHHHHTT   SS   B SS EE     EETTEE  EEB SS  S EE  B SSS BSS S:    
ExpBur          :beeebebeeeeeeebebbeebbebeeeebeeeebbebbeebbebbbbeeeeeebbbbbeebebeeeeeeebeeebbbebeeeeeeeeeebeeebeeebee:    

6uua_D_1    1201:GERVERGDVISDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKATIVNAGSSDFLEGEQVEYSRVKIANRELEANGKVGA:1300
SecStr          :S EE TT B B S   HHHHHHHH HHHHHHHHHHHHHHHHHTTT    HHHHHHHHHHHT EEEE S  SSS  TT EEEHHHHHHHHHHHHHH S   :    
ExpBur          :eeebeebeebbeeeebbbbbbebeeeebbbebbbeebbebbbeeebebbbbbbbbbbbbbbbbbebeeeeeeebeeeeebbebebbeebeebeeeeeeeb:    

6uua_D_1    1301:TYSRDLLGITKASLATESFISAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAG------------------------:1376
SecStr          : EEE    HHHHHTTSS HHHHHHHS HHHHHHHHHHHT EE   SHHHHHHHT   SSGGGHHHHHHHHHHHH -:    
ExpBur          :eeebebbbbeebbeebebbbbbbbbeebbebbbebbbeeeebebebbbbbebeeeeebbeebbeebeebeeeeee-:

Protein Model on 6uua_D_1_M_1 (TEMPLATE: 6uua )

Input Residue Numbers for Focused Sites