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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS2) | B 1 (B) | polymer(polypeptide(L)) [312 aa] | Non-structural protein 3 :R1AB_SARS2 | |
2 | b | R 1 (B) | non-polymer(GXU) | 1-(2-methoxyethyl)-2-methyl-3-(pyrazin-2-ylmethyl)benzo[f]benzimidazol-3-ium-4,9-dione | 1755C 1758Q 1788T 1789C (identity: 100.0 %/99.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7d7l_B_1 identity=99.7% |
queryA 1567:TIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTS:1666 :****************************************************************************************************: 7d7l_B_1 1:TIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTS: 100 SecStr : B EEESSSSS EE B TTS HHHHSSSEEETTEE TTS TT SS EEEE SHHHHHHHHHHHS TTHHHHHHHHHHHHTTS EETTEE : ExpBur :eeebebbbbeeeeeeeebeeeeebeeebeebbeebeebeeeebeeebeebebbbeeeeeebeebbeebbeeeeeebbbebbebbeebeebebeebeebbb: queryA 1667:IKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVE:1766 :******* ********************************************************************************************: 7d7l_B_1 101:IKWADNNSYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVE: 200 SecStr : TT HHHHHHHHHHTTS BSSHHHHHHHHHHHTT HHHHHHHHHHHT TT HHHHHHHHHTTB TT EEEEEEEETTTEEEEEEEETHH: ExpBur :beeeeebbbbbbbbbbbbbbeeebebebbeebeeebeebebbebbbbbbbbbebebeeebbbeebbeebbeebebeebebbbbbebeeeeeeeeebebbe: Contact : b b queryA 1767:AVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDV:1866 :****************************************************************************************************: 7d7l_B_1 201:AVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDV: 300 SecStr :HHEEES S HHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEE TTS SEEEEEEE SSSEEEEEEEESSSEEEEETTEEEEES EEEEEEEE: ExpBur :bbbbeebbebeebbebbebebeeeeebeebbbebebebbbbbbeeeeeebeeeebebbbbbeeeeeebebebbbbeebbbbbebeeeeeeeebebbbbbb: Contact : bb queryA 1867:FYKENSYTTTIK:1878 :************: 7d7l_B_1 301:FYKENSYTTTIK: 312 SecStr :EEE SEEE : ExpBur :bbebeeeebeee: |