[pdbjlvh2]Protein Model on 1o77_E

Protein Model on 1o77_E_1 (TEMPLATE: 1o77 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(MYD88_HUMAN)	E 1 (E)	polymer(polypeptide(L)) [137 aa]	TOLL-LIKE RECEPTOR 2 :TLR2_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1o77_E_1 identity=29.5%

queryA       161:FDAFICYCPSDIQFVQE-MIRQLEQTNYRLKLCVSDRDVLPGTCVWSIASELIEKRCRRMVVVVSDDYLQSK----ECDFQTKFALSLSPGAHQKRLI-P: 254
                : ***  *   *   *   *   **  *   ***   **  **          ***     * * *     *     * **           *    *  *:
1o77_E_1       3:YDAFVSYSERDAYWVENLMVQELENFNPPFKLCLHKRDFIPGKWIIDNIIDSIEK-SHKTVFVLSENFVKSEWSKYELDFXXXXLFXXXXXAAILILLEP: 101
SecStr          :EEEEEE  GGGHHHHHTHHHHHHHSSSS   EEEHHHH  TTS HHHHHHHHHHS-EEEEEEEE SHHHHHTTGGGGT  ----  ----- EEEEE S :    
ExpBur          :ebbbbbbbeebbebbeeebbeebeeeeeebebbbbeeeeeeeeeeeebbeebeee-bebbbbbbbeebbeebbebbbeee----ee-----ebbbbbbee:    

queryA       255:IKYKAMKKEFPSILRFITVCDY----TNPCTKSWFWTRLAKAL: 293
                :*  **    *           *            **  *  * :
1o77_E_1     102:IEKKAIPQRFCKLRKIMNTKTYLEWPMDEAQREGFWVNLRAAI: 144
SecStr          :  TTSS TT HHHHHHHHH  SEE  S TTTHHHHHHHHHHHH:    
ExpBur          :eeeeebeeebeebeebbeeeebeebbeeeeeeeebbeebbebb:

Protein Model on 1o77_E_1 (TEMPLATE: 1o77 )

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