[pdbjlvh2]Protein Model on 3mop_E_1_B

Protein Model on 3mop_E_1_B_1 (TEMPLATE: 3mop )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(MYD88_HUMAN)	E 1 (E)	polymer(polypeptide(L)) [105 aa]	Myeloid differentiation primary response protein MyD88 :MYD88_HUMAN
2	b		B 1 (B)	polymer(polypeptide(L)) [105 aa]	Myeloid differentiation primary response protein MyD88 :MYD88_HUMAN	23A 25L 26N 27M 28R 30R 31R 34S 69D 76D 112D 115K 116Y (identity: 100.0 %/100.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3mop_E_1 identity=100.0%

queryA        20:LPLAALNMRVRRRLSLFLNVRTQVAADWTALAEEMDFEYLEIRQLETQADPTGRLLDAWQGRPGASVGRLLELLTKLGRDDVLLELGPSIEEDCQKYI: 117
                :**************************************************************************************************:
3mop_E_1       2:LPLAALNMRVRRRLSLFLNVRTQVAADWTALAEEMDFEYLEIRQLETQADPTGRLLDAWQGRPGASVGRLLELLTKLGRDDVLLELGPSIEEDCQKYI:  99
SecStr          :  GGGS THHHHHHHHHHSS  SSS  HHHHHHHTT  HHHHHTTTTSS HHHHHHHHHHSSSS  HHHHHHHHHHTT HHHHHHHHHHHHHHHTTTT:    
ExpBur          :bebebbeeebbeebbeebeeeeeeebbbeebbeebebeeeebeebeeeeebbbebbeebeeeeebbbbebeebbeeeebeebbeebeebbeebbeeee:    
Contact         :   b bbbb bb  b                                  b      b                                   b  bb

Protein Model on 3mop_E_1_B_1 (TEMPLATE: 3mop )

Input Residue Numbers for Focused Sites