[pdbjlvh2]Protein Model on 1fyx_A

Protein Model on 1fyx_A_1 (TEMPLATE: 1fyx )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1] [assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(MYD88_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [149 aa]	TOLL-LIKE RECEPTOR 2 :TLR2_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1fyx_A_1 identity=29.8%

queryA       161:FDAFICYCPSDIQFVQE-MIRQLEQTNYRLKLCVSDRDVLPGTCVWSIASELIEKRCRRMVVVVSDDYLQSK----ECDFQTKFAL--SLSPGAHQKRLI: 253
                : ***  *   *   *   *   **  *   **    **   *          ***     * * *     *     * **   * *       *    * :
1fyx_A_1       6:YDAFVSYSERDAYWVENLMVQELENFNPPFKLULHKRDFIHGKWIIDNIIDSIEK-SHKTVFVLSENFVKSEWUKYELDF-SHFRLFDENNDAAILILLE: 103
SecStr          :EEEEEE  GGGHHHHHTHHHHHHTTSSS   EEEHHHH  SSS HHHHHHHHHHH-EEEEEEEE HHHHHHHTHHHHS  -S  TT GGGTT  EEEESS:    
ExpBur          :ebbbbbbbeebbebbeeebbeebeeeeeebebbbbeeeeeeeeeeeebbeebbee-bebbbbbbbeebbeebbeebbeee-eebeeeeeeeeeebbbbbe:    

queryA       254:PIKYKAMKKEFPSILRFITVCDY----TNPCTKSWFWTRLAKAL: 293
                :**  **    *           *            **  *  * :
1fyx_A_1     104:PIEKKAIPQRFUKLRKIMNTKTYLEWPMDEAQREGFWVNLRAAI: 147
SecStr          :   TTTS SS HHHHHHHHHT SEE  SSGGGHHHHHHHHHHHH:    
ExpBur          :ebeeeebeeebeebbebbeeeeeeebbeeeeeeeebbeebbeeb:

Protein Model on 1fyx_A_1 (TEMPLATE: 1fyx )

Input Residue Numbers for Focused Sites