Protein Model on 4eo7_A_1_B_1 (TEMPLATE: 4eo7 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(MYD88_HUMAN) A 1 (A) polymer(polypeptide(L)) [144 aa] Myeloid differentiation primary response protein MyD88 :MYD88_HUMAN
2 b B 1 (A) non-polymer(MG) MAGNESIUM ION 279P 282K (identity: 100.0 %/99.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4eo7_A_1 identity=99.3%
queryA       157:MPERFDAFICYCPSDIQFVQEMIRQLEQTNYRLKLCVSDRDVLPGTCVWSIASELIEKRCRRMVVVVSDDYLQSKECDFQTKFALSLSPGAHQKRLIPIK: 256
                :****************************************************************************************************:
4eo7_A_1       5:MPERFDAFICYCPSDIQFVQEMIRQLEQTNYRLKLCVSDRDVLPGTCVWSIASELIEKRCRRMVVVVSDDYLQSKECDFQTKFALSLSPGAHQKRLIPIK: 104
SecStr          :  SSEEEEEE   - HHHHHHHHHHHHTSSS   EEES GGGSTTS  EE  GGGHHHHEEEEEEEE TTGGGSHHHHHHHHHHHHS TTHHHHHEEEEE:    
ExpBur          :eeeebbbbbbbbe-beebbeebbeebeebeeebebbbeeeeebeebebeebeeeebeeebebbbbbbbeebeebeebeebeebbeebeeebeeebbbbbe:    

queryA       257:YKAMKKEFPSILRFITVCDYTNPCTKSWFWTRLAKALSLP: 296
                :*********************** ****************:
4eo7_A_1     105:YKAMKKEFPSILRFITVCDYTNPUTKSWFWTRLAKALSLP: 144
SecStr          : S  SS   GGGTTS  EETT GGG TTHHHHHHHHHH  :    
ExpBur          :beebeeeebeebeebeeeeeeeeeeeeebbeebbeebeee:    
Contact         :                      b  b                                                                          


Input Residue Numbers for Focused Sites

ex) 2,15,123