Protein Model on 8zjf_B_1 (TEMPLATE: 8zjf )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description
1 a A(ITAL_HUMAN) B 1 (A) polymer(polypeptide(L)) [909 aa] Integrin alpha-E :ITAE_HUMAN
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8zjf_B_1 identity=34.0%
queryA       152:KGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQ--FAAVQFSTSYKTEFDFSDYVKRKDPDALLKHVKHMLLLTNTFGAINYVATEVFREEL: 249
                :          *** *  *  **   **    *           ** **      ****  *        *           * *  *   *    *    :
8zjf_B_1     197:EAGTEIAIILDGSGSIDPPDFQRAKDFISNMMRNFYEKCFECNFALVQYGGVIQTEFDLRDSQDVMASLARVQNITQVGSVTKTASAMQHVLDSIFTSSH: 296
SecStr          :   EEEEEEEE  TTS HHHHHHHHHHHHHHHHHHHHH SSEEEEEEEESSS EE   TTGGGSHHHHHHHHHT         HHHHHHHHHHHTSSGGG:    
ExpBur          :eeebbbbbbbbbbeebeeebbeebbebbbebbeebbeebeebbbbbbbbbbeeeebbebeebeeeeebbeebeebeeeeebbebbbbbeebbeebbeeeb:    

queryA       250:GARPDATKVLIIITDG-------EATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLFTELQKKIYVIEGTSKQDL: 342
                :* *  * **    ***         *   *        *  ** *  *        *   ** *             *  *   *   *   ***    *:
8zjf_B_1     297:GSRRKASKVMVVLTDGGIFEDPLNLTTVINSPKMQGVERFAIGVGEEFKSARTARELNLIASDPDETHAFKVTNYMALDGLLSKLRYNIISMEGTVGDAL: 396
SecStr          :T  TTSEEEEEEE SS   S SS HHHHHS GGGSS EEEEE  SHHHHHSTHHHHHHHHS  SSSSSEE  S GGGHHHHHHHHHHTT      SS   :    
ExpBur          :ebbeebebbbbbbbbeeeeebeeebeebeeeeebeeeebbbbbbbeebeeeebeebbeebbeeeeeebbbebeebeebeebbeebeeebbeeeeeeeeee:    

queryA       343:TSFNMELSSSGISAD-LSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEV----RAGYLGYTVTWLPSRQKTSLLASGAPRYQHMGRVLLFQ: 437
                :      *   * **  *       ***** ** ** *          *                 **** *  *      *  * ***** * * *   *:
8zjf_B_1     397:---HYQLAQIGFSAQILDERQVLLGAVGAFDWSGGALLYDTRSRRGRFLNQTAAAAADAEAAQYSYLGYAVAVLHKTCSLSYIA-GAPRYKHHGAVFELQ: 492
SecStr          :---SSTT  EEEEEEE SSSEEEEEETTHHHHTB EEEEETTTTEEEEE    SSSHHHHHTTT  BTSEEEEEE SS EEEEE-EETTGGGTBEEEEEE:    
ExpBur          :---ebeebbbbebbebbeeeebbbbbbbbeeebbbbbbbbbeeeebbbbeeeeeeeeeeeebeebebbebbbbbeeeeeebbbb-bbbebeeebbbbbbe:    

queryA       438:EPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFIYQ--RRQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDG: 535
                :    *   *      * * ***** *** ** * ** *  **  **        ***  *        *     * * **    *** *  *  *   * :
8zjf_B_1     493:KE--GREASFLPVLEGEQMGSYFGSELCPVDIDMDGSTDFLLVAAPFYHVHGEEGRVYVYRLSEQDGSFSLARILSGHPGFTNARFGFAMAAMGDLSQDK: 590
SecStr          :EE--TTEEEEEEEEE  STTS BTSEEEEE TT SSS  EEEEEETT  SSSEEEEEEEEEE TTT  EEEEEEE   TT SEEEETSEEEE   SSSSS:    
ExpBur          :ee--eeebbbeeebebeeeebbbbbebbebbbeeeebbebbbbbbbebeeeeebbebbbbebbeeebebeeeeebeeeeeeeebebbebbbebeebbeee:    

queryA       536:LVDVAVGAPLEEQGA--------VYIFNGRHGGLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGAESQMIVLSSRPVVDMVTLMSFSPA: 627
                :* *** *****  **        *** **   ***  *****    *  * * ** *  *  *  ******  **   *  *  *****     * * * :
8zjf_B_1     591:LTDVAIGAPLEGFGADDGASFGSVYIYNGHWDGLSASPSQRIRASTVAPGLQYFGMSMAGGFDISGDGLADITVGTLGQAVVFRSRPVVRLKVSMAFTPS: 690
SecStr          :S  EEEEETTTTTT GGG    EEEEE  BTTBS SS SEEEEGGGT SS  STTSEEEEEE  SSSSS EEEEE SB EEEEEE  EE EE     SSS:    
ExpBur          :bbbbbbbbbbbeeeeeeeebbbbbbbbbbeeebbbeeebbebebeebbebbeebbbbbbbebebeeeebbbbbbbbebbbbbbbbbbbbebebebebeee:    

queryA       628:EIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQ-GRLVANLTYTLQLDGHRTRRRGLFPGGRHEL--RRNIAVTTSMSCTDFSF---HFPVCVQDL: 721
                :  *                 **   ** * *       *   * *  **  *    ***      *  *   *      *  * *          *  * :
8zjf_B_1     691:ALPI-----------GFNGVVNVRLCFEISSVTTASESGLREALLNFTLDVDVGKQRRRLQCSDVRSCLGCLREWS-SGSQLCEDLLLMPTEGELCEEDC: 778
SecStr          :SB T-----------T  S EEE  EEEE   SSS TTSTTT EEEE EEES S SS S EESSGGGTT EEEE  -SSSEEE  EEEE STT  TTS  :    
ExpBur          :ebee-----------ebeeebebebbbeeebebeeeebbbeebebbbebebbeeeeeebbebeeeeebeebeeebe-eeeebeeebebbebeebeeeeeb:    

queryA       722:ISPINVSLNFSLWEEEGTPRDQRAQGKDIPPIL-RPSLHSETWEIPFEKNCGEDKKCEANLRVSFSPARSRALRLTAFASLSVELSLSNLEEDAYWVQLD: 820
                : *   *     *   **       *     *** *          * ** *     * * *           *       *     * *  ** *     :
8zjf_B_1     779:FSNASVKVSYQLQTPEG-------QTDHPQPILDRYTEPFAIFQLPYEKACKNKLFCVAELQLATTVSQ-QELVVGLTKELTLNINLTNSGEDSYMTSMA: 870
SecStr          :SS EEEEE   EE  SS-------  SS   EE TTS S   EEE B  SSSSTT     EEE  EES -    TTTTSSEEEEE EEE SS   SEE  :    
ExpBur          :ebebebebebebeeeee-------ebeebbbbbbeeeeeebeeebebebeeeeeeebbbebebebeeee-ebeeeeeeeeeebebebebebeebbbbbbb:    

queryA       821:LHFPPGLSFRKVEMLKPHSQIPVSCEE-LPEESRLLSRALSCNVSSPIFK---AGHSVALQMMFNTLVNSSWGDSVELHANVTCNNEDSDLLEDN: 911
                :*  *  *      * ** *     *    *  * *      *    *  *   *  **  *   *   *            **  **   *    :
8zjf_B_1     871:LNYPRNLQLKR--MQKPPSP-NIQCDDPQPVASVLI---MNCRIGHPVLKRSSAHVSVVWQLEENAFPNR----TADITVTVTNSNERRSLANET: 955
SecStr          :EE  TTEEEEE--EE   SS-          SSS  ---       TT  S B  EEEEEEESS      ----SS  EEEEEE SSS   EEE :    
ExpBur          :bebeeebeeee--eeebeee-ebebeeeeeeeeebe---bebebbebebeeeebeeebbbeeeeeebeee----eebbebebebebeeeeebeee:    


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