[pdbjlvh2]Protein Model on 6nca_YA_1_L

Protein Model on 6nca_YA_1_L_1 (TEMPLATE: 6nca )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:12]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	YA 1 (Q)	polymer(polypeptide(L)) [275 aa]	HLA class I histocompatibility antigen, A-2 alpha chain :1A02_HUMAN
2	b		L 1 (5)	polymer(polypeptide(L)) [9 aa]	Replication and transcription activator :RTA_EBVG	29M 31Y 33F 69M 87E 90N(K) 94Q(H) 97T 101D 104T 105L 108Y 121I(R) 123Y 147Y 167T 171W 176E(V) 179Q 180L 183Y 191W 195Y (identity: 82.6 %/93.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6nca_YA_1 identity=93.1%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :************************************************************* *** *** *** ******************** * ***:
6nca_YA_1      1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100
SecStr          :  EEEEEEEEEE  SSSSS EEEEEEEETTEEEEEEETT SS S EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbbbebebebeeeeeebebebebebbebebbebbbebeeeebeeebebbeebeeebbebbbeebeeebeebeeebeebeeeeeeeeeeebebebbbb:    
Contact         :    b b b                                   b                 b  b   b  b   b  bb  b            b b 

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :****** ****** * ********** ************** ** ****** ******** ********************** ********  ******:
6nca_YA_1    101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200
SecStr          :EEE TTSSEEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS  B    EEEEEESSSSEEE:    
ExpBur          :bbbbeeeeeeebebebbbeeeebbbbeeebeebeeeeebbeebeeebeeeeebeebeeebeeebbeebeebbeebeeebeeeeebeeebbeeeeeeeebb:    
Contact         :                      b                   b   b    b  bb  b       b   b                             

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
                :****** ********************************************* **********************:
6nca_YA_1    201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr          :EEEEEEEEBSS  EEEEEESS EE SSEEE   EE SSS EEEEEEEEEETT TTTEEEEEE TT SS EEE   :    
ExpBur          :bebebeebbebebebbbbeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeeeeee:

Protein Model on 6nca_YA_1_L_1 (TEMPLATE: 6nca )

Input Residue Numbers for Focused Sites