Protein Model on 4l29_V_1_X_1 (TEMPLATE: 4l29 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:8]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HLAA_HUMAN) V 1 (O) polymer(polypeptide(L)) [276 aa] HLA class I histocompatibility antigen, A-2 alpha chain :1A02_HUMAN
2 b X 1 (n) polymer(polypeptide(L)) [9 aa] NY-ESO1 DOUBLE MUTANT (1Y, 9V) 29M 31Y 33F 69M 87E 90N(K) 91V 94Q(H) 97T 98D(H) 101D 104T 105L 108Y 121I(R) 123Y 140D(Y) 147Y 167T 170K 171W 183Y 187T 191W 195Y (identity: 80.0 %/93.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4l29_V_1 identity=93.1%
queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :************************************************************* *** *** *** ******************** * ***:
4l29_V_1       1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100
SecStr          :  EEEEEEEEEE  TTT S EEEEEEEETTEEEEEEETTSSS S EE SGGGGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT  TTS  EEEEEEE:    
ExpBur          :eebebebebebebbeeeeeeebebbbebbebebbbbbbebeeeebeeebebbeebeeebbebbbeebeeeeeebeebbeebeeeeeeeeeeebebebbbb:    
Contact         :    b b b                                   b                 b  bb  b  bb  b  bb  b            b b 

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :****** ****** * ********** ************** ** ****** ******** ********************** ********  ******:
4l29_V_1     101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200
SecStr          :EEE TTSSEEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS  B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeeeeeeebbbebbbeeeebbebeeebeebebeeebbeebeeebeeeeebeebeeebebebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :               b      b                   b  bb           b   b   b   b                             

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
                :****** ********************************************* **********************:
4l29_V_1     201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr          :EEEEEEEEBSS  EEEEEETTEE GGGEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEEE  :    
ExpBur          :bebbbeebbbbebebbbbeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebebbeeeeeeeee:    


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