Protein Model on 8wul_R_1_T_1
(TEMPLATE: 
8wul
)Protein Model on 8wul_R_1_T_1
(TEMPLATE: 8wul
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAA_HUMAN) | R 1 (R) | polymer(polypeptide(L)) [274 aa] | MHC class I antigen :A0A6M6CC39_HUMAN | |
| 2 | b | T 1 (T) | polymer(polypeptide(L)) [9 aa] | KRAS-G12V nonamer peptide | 31Y 33F(Y) 69M 83Y 87E 90N 94Q 101D 104T 105L 108Y 119I 123Y 138R 140D 167T 170K 171W 174A 176E(A) 179Q 180L(Q) 183Y 187T(R) 191W 195Y (identity: 84.6 %/97.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8wul_R_1 identity=97.4% |
queryA 25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
:******** ******************************************************************************** **********:
8wul_R_1 1:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 100
SecStr : EEEEEEEEEE TTS S EEEEEEEETTEEEEEEETTSSS S EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE:
ExpBur :eebbbebebebebeeeeeeeebebbbebeebebbebebebeeeebeeebebbeebeeebbeebbeebeebbeebeeebeebeeeeeeeeeeebebebbbb:
Contact : b b b b b b b b bb b b b
queryA 125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
:**** ********************************************** *** **** * *************************************:
8wul_R_1 101:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200
SecStr :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHTTHHHHHHHHHHHHTHHHHS B EEEEEEEEETTTEEE:
ExpBur :bbbbeebeeeebbbebbbeeeebbebeeebeebebeeebbeebbeeeeeeeebeebeeebeeebbebbeebbeebeeebeeeeebeeebeeeeeeeeebb:
Contact : b b b bb b b bb b b b b
queryA 225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 298
:**************************************************************************:
8wul_R_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 274
SecStr :EEEEEEEEBSS EEEEEESSSB TTEEE EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE :
ExpBur :bbbbbeebbbbebebebbeeeeeeeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeeeee:
|
[assembly_id:4]
[help]