[pdbjlvh2]Protein Model on 8i5c_JA_1_LA

Protein Model on 8i5c_JA_1_LA_1 (TEMPLATE: 8i5c )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:8]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	JA 1 (j)	polymer(polypeptide(L)) [274 aa]	MHC class I antigen (Fragment) :U5YJJ6_HUMAN
2	b		LA 1 (l)	polymer(polypeptide(L)) [9 aa]	peptide KRAS-G12V-9	29M 31Y 33F(Y) 83Y 87E 94Q 97T 101D 104T 105L 108Y 119I 123Y 138R 147Y 167T 170K 171W 176E(A) 179Q 180L(Q) 183Y 187T(R) 191W 195Y (identity: 84.0 %/96.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8i5c_JA_1 identity=96.7%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :******** ******************************************************************************** **********:
8i5c_JA_1      1:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 100
SecStr          :  EEEEEEEEEE  TTTSS EEEEEEEETTEEEEEEETTSSS S EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT  SSS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeeeebebbbebbeeebbbbbbebeeeebeeebebbeebeeebbeebbeebeeebeebeeebeebeeeeeeeeeeebbbebebb:    
Contact         :    b b b                                                 b   b      b  b   b  bb  b          b   b 

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :**** ********************************************** *** **** * *************************************:
8i5c_JA_1    101:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200
SecStr          :EEE TT  EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS  B  EEEEEEEESSSSEEE:    
ExpBur          :bbbbeebeeeebbbebbbeeeebbebeeebeebeeeeebbeebbeeeeeeeebeebbeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :             b        b                   b  bb    b  bb  b   b   b   b                             

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 298
                :******************************************** ******* *********************:
8i5c_JA_1    201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWVAVVVPSGQEQRYTCHVQHEGLPKPLTLRW: 274
SecStr          :EEEEEEEEBSS EEEEEEETTEE GGGEEE   EE SSS EEEEEEEEEETT GGGEEEEEEETT SS EEEE :    
ExpBur          :bebbbebbbbeebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebebbeeeeebee:

Protein Model on 8i5c_JA_1_LA_1 (TEMPLATE: 8i5c )

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