Protein Model on 4l29_J_1_L_1
(TEMPLATE: 
4l29
)Protein Model on 4l29_J_1_L_1
(TEMPLATE: 4l29
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAA_HUMAN) | J 1 (G) | polymer(polypeptide(L)) [276 aa] | HLA class I histocompatibility antigen, A-2 alpha chain :1A02_HUMAN | |
| 2 | b | L 1 (f) | polymer(polypeptide(L)) [9 aa] | NY-ESO1 DOUBLE MUTANT (1Y, 9V) | 31Y 33F 69M 87E 90N(K) 94Q(H) 97T 98D(H) 101D 104T 105L 108Y 121I(R) 123Y 140D(Y) 147Y 167T 170K 171W 176E(V) 183Y 187T 191W 195Y (identity: 75.0 %/93.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4l29_J_1 identity=93.1% |
queryA 25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
:************************************************************* *** *** *** ******************** * ***:
4l29_J_1 1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100
SecStr : EEEEEEEEEE TTS S EEEEEEEETTEEEEEEETTSSS S EE STTTTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE:
ExpBur :eebbbebebebebbeeeeebebebbbebbebebbebbbebeeeebeeebebbeebeeebbebbbeebeeebeebeeebeebeeeeeeeeeeebebebbbb:
Contact : b b b b b b bb b bb b b b
queryA 125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
:****** ****** * ********** ************** ** ****** ******** ********************** ******** ******:
4l29_J_1 101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200
SecStr :EEE TTS EEEEEEEEEETTEEEEEE TTSSSEEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEE SSSEEE:
ExpBur :bbbbeeeeeeebbbebbbeeeebbbbeeebeebeeeeebbeebeeebeeeeebeebbeebebebbeebeebbeebeeebeeeeebeeeeeeeeeeeeebb:
Contact : b b b bb b b b b b
queryA 225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
:****** ********************************************* **********************:
4l29_J_1 201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr :EEEEEEEEBSS EEEEEEETTEE GGG EE EE SSS EEEEEEEEEETT GGGEEEEEEETTSSS EEEE :
ExpBur :bebebeebbbbebebbbbeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeee:
|
[assembly_id:4]
[help]