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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAA_HUMAN) | J 1 (HHH) | polymer(polypeptide(L)) [276 aa] | MHC class I antigen :Q861F7_HUMAN | |
2 | b | H 1 (JJJ) | polymer(polypeptide(L)) [9 aa] | Melanoma-associated antigen 10 :MAGAA_HUMAN | 29M 31Y 33F 69M 87E 90N(K) 91V 94Q(H) 97T 100V 101D 104T 105L 108Y 121I(R) 123Y 140D(Y) 147Y 167T 170K 171W 176E(V) 180L 183Y 191W 195Y (identity: 80.8 %/93.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7pdw_J_1 identity=93.1% |
queryA 25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124 :************************************************************* *** *** *** ******************** * ***: 7pdw_J_1 2:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 101 SecStr :- EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETTSSS S EE SGGGGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE: ExpBur :-ebbbebebebebeeeeeebebebebebbebebbebbeebeeeebbeebebbeebeeebbebbbeebeebeeebeeebeebeeeeeeeeeeebebebbbb: Contact : b b b b b bb b b bb bb b b b queryA 125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224 :****** ****** * ********** ************** ** ****** ******** ********************** ******** ******: 7pdw_J_1 102:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 201 SecStr :EEE TT EEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEESSSSEEE: ExpBur :bbbbeebeeeebbbebbbeeeebbbbeeebeebebeeebbeebeeebeeeeebeebbeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb: Contact : b b b bb b b b b b queryA 225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299 :****** ********************************************* **********************: 7pdw_J_1 202:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 276 SecStr :EEEEEEEEBSS EEEEEETTEEE TTEEE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEEE : ExpBur :bebbbeebbbbebebbbeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeee: |