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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAA_HUMAN) | I 1 (K) | polymer(polypeptide(L)) [276 aa] | MHC class I antigen alpha chain :U5YKE0_HUMAN | |
2 | b | J 1 (L) | polymer(polypeptide(L)) [100 aa] | Beta-2-microglobulin :B2MG_HUMAN | 32F 33F 34T 36V 45R 47I 49V 51Y 56Q 59R 116S 117H 120Q 121I(R) 122M 139Q 141A 143D 144G 146D 216H 226R 228W 255V 256E 257T 258R 259P 260A 261G 262D 266Q 268W (identity: 97.0 %/93.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8dnt_I_1 identity=93.1% |
queryA 25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124 :************************************************************* *** *** *** ******************** * ***: 8dnt_I_1 2:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 101 SecStr : EEEEEEEEEE SSS S EEEEEEEETTEEEEEEESSSSS S EE SSSSTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT SS EEEEEEE: ExpBur :eebbbebebebeeeeeeeeeebebbbebbebebbebebeeeeeebeeebebbeebeeebbeebbeebeebbeebeeebeebeeeeeeeeeeebebebbbb: Contact : bbb b b b b b b b bb bbb queryA 125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224 :****** ****** * ********** ************** ** ****** ******** ********************** ******** ******: 8dnt_I_1 102:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 201 SecStr :EEE SSSSEEEEEEEEEESSSEEEEE TTSSS B SSSSHHHHHHHHHHT HHHHHHHTTTHHHHHHHHHHHHHSSSSS EEEEEEEESSSSEEE: ExpBur :bebbeebeeeebbbebbbeeeebbbbeeebeebeeeeebbeebeeeeeeeebbeebeeebebebbeebeebbeebeeebebeeebeeebeeeeeeeeebb: Contact : b b bb b b queryA 225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299 :****** ********************************************* **********************: 8dnt_I_1 202:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 276 SecStr :EEEEEESBSSS EEEEEEETTEEE SSEEE EE SSS EE EEEEEEETTGGGTEEEEEEESS SS EEEE : ExpBur :bebebbebbbbebebebbeeeeebeeeeeeeeeeeeeeebbeebbbbbbeeeebeebbbebebeebeeeeebeee: Contact : b b bbbbbbbb b b |