Protein Model on 8es8_I_1_G_1 (TEMPLATE: 8es8 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HLAA_HUMAN) I 1 (N) polymer(polypeptide(L)) [275 aa] MHC class I antigen :Q861F7_HUMAN
2 b G 1 (A) polymer(polypeptide(L)) [257 aa] PN45545 TCR alpha chain 82E 83Y 86Q(G) 87E 89R 90N(K) 186G 187T 190E 191W 194R (identity: 81.8 %/93.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8es8_I_1 identity=93.1%
queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :************************************************************* *** *** *** ******************** * ***:
8es8_I_1       2:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 101
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS S EE SGGGGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT  SSS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeebebebebebbeeebbebbeeeeeeebeeebebbeebeeebbebbbeebeebbeebeeebeebeeeeeeeeeeebebebbbb:    
Contact         :                                                         bb  bb bb                                  

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :****** ****** * ********** ************** ** ****** ******** ********************** ********  ******:
8es8_I_1     102:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 201
SecStr          :EEE TT  EEEEEEEEEETTEEEEEE TTSSSEEE SHHHHHHHHHHHHHTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  B  EEEEE SSSEEE:    
ExpBur          :bbbbeeeeeeebbbebbbeeeebbebeeebeebebeeeebeebeeeeeeeeebeebbeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :                                                             bb  bb  b                              

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
                :****** ********************************************* **********************:
8es8_I_1     202:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 276
SecStr          :EEEEEEEEBSS  EEEEEETTEE SSSEEE   EE SSS EEEEEEEEEETT STTEEEEEE SS SS   EE  :    
ExpBur          :bebebbebbbbebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeebebe:    


Input Residue Numbers for Focused Sites

ex) 2,15,123