[pdbjlvh2]Protein Model on 8es9_I_1_B

Protein Model on 8es9_I_1_B_1 (TEMPLATE: 8es9 )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	I 1 (N)	polymer(polypeptide(L)) [275 aa]	MHC class I antigen :Q861F7_HUMAN
2	b		B 1 (B)	polymer(polypeptide(L)) [287 aa]	PN45428 TCR beta chain	85D 89R 90N(K) (identity: 66.7 %/93.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8es9_I_1 identity=93.1%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :************************************************************* *** *** *** ******************** * ***:
8es9_I_1       2:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 101
SecStr          :  EEEEEEEEEE  SSSSS EEEEEEEETTEEEEEEETTSSS S EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT  SSS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeeeebebebebeeeebbebbeeeeeeebeeebebbeebeeebbeeebeebeebbeebeeebeebeeeeeeeeeeebebebbbb:    
Contact         :                                                            b   bb                                  

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :****** ****** * ********** ************** ** ****** ******** ********************** ********  ******:
8es9_I_1     102:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 201
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSSSEEE SSHHHHHHHHHHTTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS     B  EEEEE SSSEEE:    
ExpBur          :bbbbeeeeeeebbbebbbeeeebbebeeebeebebeeeebeebeeebeeeeebeebeeebeeebbeebeebbeebeeebeeeeebebebeeeeeeeeebb:    

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
                :****** ********************************************* **********************:
8es9_I_1     202:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 276
SecStr          :EEEEEEEESSS EEEEEEETTEE  SSEEE   EE SSS EEEEEEEEEETT GGGEEEEEEETT SS   B   :    
ExpBur          :bebebeebbebebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeeeeee:

Protein Model on 8es9_I_1_B_1 (TEMPLATE: 8es9 )

Input Residue Numbers for Focused Sites