[pdbjlvh2]Protein Model on 7ow4_G_1_I

Protein Model on 7ow4_G_1_I_1 (TEMPLATE: 7ow4 )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:3]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	G 1 (G)	polymer(polypeptide(L)) [274 aa]	MHC class I antigen :A0A583ZB34_HUMAN
2	b		I 1 (I)	polymer(polypeptide(L)) [8 aa]	KRAS G12D peptide (VVVGADGVGK) :RASN_HUMAN	29M 31Y 33F(Y) 69M 83Y 87E 90N 101D 104T 105L 108Y 119I 123Y 140D 167T 170K 171W 174A 179Q 180L(Q) 183Y 187T(R) 191W 195Y (identity: 87.5 %/97.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7ow4_G_1 identity=97.4%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :******** ******************************************************************************** **********:
7ow4_G_1       1:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 100
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSTT   EE SGGGTT  HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeebebebebebbebebbebebeeeeeebeeebebbeebeeebbeebbeebeeebeebeeebeebeeeeeeeeeeebebebbbb:    
Contact         :    b b b                                   b             b   b  b          b  bb  b          b   b 

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :**** ********************************************** *** **** * *************************************:
7ow4_G_1     101:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200
SecStr          :EEE TT  EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEESSSSEEE:    
ExpBur          :bbbbeeeeeeebbbebbbeeeebbbbeeebeebebeeebbeebbeeeeeeebbeebbeebebebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :               b                          b  bb  b    bb  b   b   b   b                             

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 298
                :**************************************************************************:
7ow4_G_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 274
SecStr          :EEEEEEEEBSS  EEEEEETTEEE TTEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE  :    
ExpBur          :bbbbbeebbebebebebbeeeeebeeeeeebeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebee:

Protein Model on 7ow4_G_1_I_1 (TEMPLATE: 7ow4 )

Input Residue Numbers for Focused Sites