[pdbjlvh2]Protein Model on 6id4_E_1_I

Protein Model on 6id4_E_1_I_1 (TEMPLATE: 6id4 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	E 1 (E)	polymer(polypeptide(L)) [275 aa]	MHC class I antigen :F6IQY1_HUMAN
2	b		I 1 (T)	polymer(polypeptide(L)) [9 aa]	peptide	29M 31Y 33F(Y) 69M 86Q 87E 90N 91V 94Q 97T 100V 101D 104T 108Y 123Y 138R 140D 147Y 167T 170K 171W 174A 176E(A) 179Q 180L(Q) 183Y 187T(R) 191W 195Y (identity: 86.2 %/97.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6id4_E_1 identity=97.5%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :******** ******************************************************************************** **********:
6id4_E_1       2:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 101
SecStr          :  EEEEEEEEEE  TTTSS EEEEEEEETTEEEEEEETTSSS S EE STTTTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT  TTS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeeeebebebebbeeebbebbbebeeeebbeebebbeebeeebbeebbeebeebbeebeeebeebeeeeeeeeeeebebebebb:    
Contact         :    b b b                                   b                bb  bb  b  b  bb  b   b              b 

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :**** ********************************************** *** **** * *************************************:
6id4_E_1     102:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 201
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSTTHHHHHHHHHHHTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEEETTTEEE:    
ExpBur          :bbbbeeeeeeebbbebbbeeeebbbbeeebeebebeeebbeebeeeeeeeebbeebbebbebebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :             b b      b                   b  bb  b b  bb  b   b   b   b                             

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
                :***************************************************************************:
6id4_E_1     202:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 276
SecStr          :EEEEEEEEBSS  EEEEEETTEE  TTEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE   :    
ExpBur          :bbbebebbbbbebebebbbeeeeeeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeeeeee:

Protein Model on 6id4_E_1_I_1 (TEMPLATE: 6id4 )

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