[pdbjlvh2]Protein Model on 5wjn_D

Protein Model on 5wjn_D_1 (TEMPLATE: 5wjn )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(HLAA_HUMAN)	D 1 (D)	polymer(polypeptide(L)) [274 aa]	HLA class I histocompatibility antigen, A-11 alpha chain :1A11_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5wjn_D_1 identity=97.4%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :******** ******************************************************************************** **********:
5wjn_D_1       1:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 100
SecStr          :  EEEEEEEEEE  SSSSS EEEEEEEETTEEEEEEETTSSS S EE STTTTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT  TTS  EEEEEEE:    
ExpBur          :eebebbbebebebeeeeeebebebebebbebebbbbbeebeeeebeeebebbeebeeebbeebbeebeebbeebeeebeebeeeeeeeeeeebebebbbb:    

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :**** ********************************************** *** **** * *************************************:
5wjn_D_1     101:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEESSSSEEE:    
ExpBur          :bbbbeeeeeeebebebbbeeeebbebeeebeebebeeebbeebbeeeeeeebbeebbebbeeebbebbeebbeebeeebeeeeebeeebeeeeeeeeebb:    

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 298
                :**************************************************************************:
5wjn_D_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 274
SecStr          :EEEEEEEEBSS EEEEEEETTEEE TTEEE   EE SSS EEEEEEEEEETT GGGEEEEEEETT SS EEEE :    
ExpBur          :bbbbbbebbbbebebebbeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebebbeeeeebee:

Protein Model on 5wjn_D_1 (TEMPLATE: 5wjn )

Input Residue Numbers for Focused Sites