[pdbjlvh2]Protein Model on 7u21_D_1_F

Protein Model on 7u21_D_1_F_1 (TEMPLATE: 7u21 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	D 1 (D)	polymer(polypeptide(L)) [275 aa]	MHC class I antigen, A-2 alpha chain :A0A5B8RNS7_HUMAN
2	b		F 1 (F)	polymer(polypeptide(L)) [9 aa]	PGM5 peptide (465-473) (H5Y)	29M 31Y 33F 87E 90N(K) 94Q(H) 97T 101D 104T 105L 108Y 121I(R) 123Y 140D(Y) 167T 171W 174A 176E(V) 183Y 191W 195Y (identity: 76.2 %/93.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7u21_D_1 identity=93.1%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :************************************************************* *** *** *** ******************** * ***:
7u21_D_1       1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS S EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeebebebbbebbebebbebebeeeeeebeeebebbeebeeebbebbbeebeeebeebeebbeebeeeeeeeeeeebebebebb:    
Contact         :    b b b                                                     b  b   b  b   b  bb  b            b b 

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :****** ****** * ********** ************** ** ****** ******** ********************** ********  ******:
7u21_D_1     101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSSSEEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS  B  EEEEEEEESSSSEEE:    
ExpBur          :bbbbeebeeeebbbebbbeeeebbebeeebeebebeeebbeebbeeeeeeeebeeeeeebebebbeebeebbeebeeebeeeeebeeebbeeeeeeeebb:    
Contact         :               b                          b   b  b b      b       b   b                             

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
                :****** ********************************************* **********************:
7u21_D_1     201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr          :EEEEEEEEBSS  EEEEEETTEE GGG EE   EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEEE  :    
ExpBur          :bebbbeebbbbebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeee:

Protein Model on 7u21_D_1_F_1 (TEMPLATE: 7u21 )

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