Protein Model on 1q94_D_1_F_1
(TEMPLATE: 
1q94
)Protein Model on 1q94_D_1_F_1
(TEMPLATE: 1q94
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAA_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [275 aa] | HLA class I histocompatibility antigen, A-11 alpha chain :1A11_HUMAN | |
| 2 | b | F 1 (F) | polymer(polypeptide(L)) [9 aa] | nonamer reverse transcriptase (AIFQSSMTK) :POL_HV1Z2 | 29M 31Y 33F(Y) 69M 83Y 87E 90N 91V 94Q 97T 101D 105L 108Y 123Y 138R 140D 147Y 167T 170K 171W 174A 176E(A) 179Q 180L(Q) 183Y 187T(R) 191W 195Y (identity: 85.7 %/97.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1q94_D_1 identity=97.5% |
queryA 25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
:******** ******************************************************************************** **********:
1q94_D_1 1:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 100
SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETTSSS S EESSTTGGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT SSS EEEEEEE:
ExpBur :eebbbbbebebebeeeeeebebebebebeebebbebbeeeeeeebeeebebbeebeeebbeebbeebeeebeebeeebeebeeeeeeeeeeebebebbbb:
Contact : b b b b b b bb b b b b b b
queryA 125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
:**** ********************************************** *** **** * *************************************:
1q94_D_1 101:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200
SecStr :EEE TT EEEEEEEEEETTEEEEEE TTSS EEE STTHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS B EEEEES SSEEE:
ExpBur :bbbbeeeeeeebebebbbeeeebbbbeeebeebebeeebbeebeeebeeeeebeebeeebeeebbeebeebbeebeeebeeeeebeeebbeeeeeeeebb:
Contact : b b b b bb b b bb b b b b
queryA 225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
:***************************************************************************:
1q94_D_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr :EEEEEEEEBSS EEEEEETTB SSEEE EE SSS EEEEEEEEEETTS TTEEEEEE TTSSS EEE :
ExpBur :bbbebeebbebebebebeeeeeeeeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebebbeeeeebeee:
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[assembly_id:2]
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