[pdbjlvh2]Protein Model on 1duy_D_1_F

Protein Model on 1duy_D_1_F_1 (TEMPLATE: 1duy )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	D 1 (D)	polymer(polypeptide(L)) [275 aa]	HLA-A2*0201 :1A02_HUMAN
2	b		F 1 (F)	polymer(polypeptide(L)) [8 aa]	HTLV-1 OCTAMERIC TAX PEPTIDE	31Y 33F 69M 87E 90N(K) 91V 94Q(H) 97T 100V 101D 104T 105L 108Y 121I(R) 123Y 140D(Y) 167T 170K 171W 179Q 180L 183Y (identity: 81.8 %/93.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1duy_D_1 identity=93.1%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :************************************************************* *** *** *** ******************** * ***:
1duy_D_1       1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100
SecStr          :  EEEEEEEEEE  TTS S EEEEEEEETTEEEEEEETTSSS S EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebebbbebebebeeeeeebebebbbebbebebbebeeeeeeeebeeebebbeebeeebbebbbeebeebbeebeeebeebeeeeeeeeeeebebebbbb:    
Contact         :      b b                                   b                 b  bb  b  b  bb  bb  b            b b 

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :****** ****** * ********** ************** ** ****** ******** ********************** ********  ******:
1duy_D_1     101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeeeeeeebebebbbeeeebbbbeeebeebeeeeebbeebeeebeeeebbeebeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :               b                          b  bb       bb  b                                         

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
                :****** ********************************************* **********************:
1duy_D_1     201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr          :EEEEEEEEBSS  EEEEEETTEE GGG EE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEEE  :    
ExpBur          :bebbbeebbebebebebeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeee:

Protein Model on 1duy_D_1_F_1 (TEMPLATE: 1duy )

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