Protein Model on 7stf_D_1_E_1 (TEMPLATE: 7stf )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HLAA_HUMAN) D 1 (A) polymer(polypeptide(L)) [276 aa] HLA class I histocompatibility antigen, A alpha chain :HLAA_HUMAN
2 b E 1 (B) polymer(polypeptide(L)) [101 aa] Beta-2-microglobulin :B2MG_HUMAN 32F 34T 36V 41R 47I 49V 56Q 59R 61D 72R 111Q 118T 120Q 121I 139Q 141A 143D 144G 145K 146D 216H 226R 228W 255V 256E 257T 258R 259P 260A 261G 262D 266Q 268W (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7stf_D_1 identity=100.0%
queryA        26:SHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYGC: 125
                :****************************************************************************************************:
7stf_D_1       2:SHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYGC: 101
SecStr          : B  EEEEE     SSSS   EEEEEETTEEEE  BSSSS SS  B SGGGGGG HHHHHHHHHHHHHHHHHHHHHTTTHHHHTT  SSS    EE    :    
ExpBur          :eebbbbebebebbeeeeebebebbbebbbbebbbbbbeeeeeebeeebebbeebeeebbeebbeebeebbeebeeebeebeeeeeeeeeeebebebbbbb:    
Contact         :      b b b    b     b b      b  b b          b                                      b      b bb    

queryA       126:DVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEATL: 225
                :****************************************************************************************************:
7stf_D_1     102:DVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEATL: 201
SecStr          : B TTS B     BEESSSS   BB SSSS B   STTHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHTTTTSS     EEEEEEE SSSSEEEE:    
ExpBur          :bbbeebebeebbbebbbeeeebbbbeeebeebebeeebbeebeeebeeeeebeebbeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebbb:    
Contact         :             b b bbbb                                                                     b         

queryA       226:RCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWELS: 301
                :****************************************************************************:
7stf_D_1     202:RCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWELS: 277
SecStr          :EEEEES SSS  EEEEEETTEE GGG EE   EE SSS EEEEEEEEEETTGGGGEEEEEE TT SS EEEE    :    
ExpBur          :bbebebbbbbebebbbeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbebebebbeeeeebebeee:    
Contact         :b b                          bbbbbbbb   b b                                                         


Input Residue Numbers for Focused Sites

ex) 2,15,123