Protein Model on 7s8r_D_1_E_1
(TEMPLATE: 
7s8r
)Protein Model on 7s8r_D_1_E_1
(TEMPLATE: 7s8r
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAA_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [275 aa] | HLA class I histocompatibility antigen, A alpha chain :U5YJK1_HUMAN | |
| 2 | b | E 1 (E) | polymer(polypeptide(L)) [100 aa] | Beta-2-microglobulin :B2MG_HUMAN | 32F 33F(Y) 34T 36V 47I 49V 51Y 56Q 59R 72R 116S 117H 120Q 121I 122M 139Q 140D 141A 143D 144G 146D 214T 216H 226R 228W 256E 258R 259P 260A 261G 262D 266Q 268W (identity: 97.0 %/97.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7s8r_D_1 identity=97.5% |
queryA 25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
:******** ******************************************************************************** **********:
7s8r_D_1 1:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 100
SecStr : EEEEEEEEEE TTTSS EEEEEEEETTEEEEEEETT SS S EE STTTGGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE:
ExpBur :eebbbebebebebbeeeeebebebbbebbebebbebbeebeeeebbbebebbeeebeebbeebbeebeeebeebeeebeebeeeeeeeeeeebebebebb:
Contact : bbb b b b b b b b bb bbb
queryA 125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
:**** ********************************************** *** **** * *************************************:
7s8r_D_1 101:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200
SecStr :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTTTTTS B EEEEEEEE SSSEEE:
ExpBur :bbbbeeeeeeebbbebbbeeeebbbbeeebeebebeeebbeebeeeeeeeebbeebbeebeeebbebbeebbeebeeebeeeeebeeebeeeeeeeeebb:
Contact : bbb bb b b b
queryA 225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
:***************************************************************************:
7s8r_D_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr :EEEEEEEEBSS EEEEEEETTEE TTEEE EE SSS EEEEEEEEEETT GGGEEEEEEETT SS EEE :
ExpBur :bebbbeebbbbebebebbeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeebeee:
Contact : b b b bbbbb b b
|
[assembly_id:2]
[help]