[pdbjlvh2]Protein Model on 5yxn_C_1_E

Protein Model on 5yxn_C_1_E_1 (TEMPLATE: 5yxn )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	C 1 (C)	polymer(polypeptide(L)) [275 aa]	HLA class I histocompatibility antigen, A-2 alpha chain :1A02_HUMAN
2	b		E 1 (I)	polymer(polypeptide(L)) [10 aa]	NS3 peptide	29M 31Y 33F 69M 87E 90N(K) 91V 94Q(H) 97T 101D 104T 105L 108Y 121I(R) 123Y 140D(Y) 167T 170K 171W 174A 176E(V) 179Q 180L 183Y 187T 191W 195Y (identity: 81.5 %/93.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5yxn_C_1 identity=93.1%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :************************************************************* *** *** *** ******************** * ***:
5yxn_C_1       1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS S EE SSGGGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeebebebbbebbebebbebbbebeeeebeeebebbeebeeebbebbbeebeeebeebeebbeebeeeeeeeeeeebebebbbb:    
Contact         :    b b b                                   b                 b  bb  b  b   b  bb  b            b b 

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :****** ****** * ********** ************** ** ****** ******** ********************** ********  ******:
5yxn_C_1     101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200
SecStr          :EEE TT  EEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS  B  EEEEEEEESSSSEEE:    
ExpBur          :bbbbeebeeeebbbebbbeeeebbebeeebeebebeeebbeebeeebeeeebbeeebeebebebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :               b                          b  bb  b b  bb  b   b   b   b                             

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
                :****** ********************************************* **********************:
5yxn_C_1     201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr          :EEEEEEEEBSS  EEEEEETTEE  TTEEE   EE SSS EEEEEEEEEESS GGGEEEEEE TT SS EEE   :    
ExpBur          :bbbbbeebbbbebebebbeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebbee:

Protein Model on 5yxn_C_1_E_1 (TEMPLATE: 5yxn )

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