[pdbjlvh2]Protein Model on 8rhq_C_1_A

Protein Model on 8rhq_C_1_A_1 (TEMPLATE: 8rhq )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	C 1 (C)	polymer(polypeptide(L)) [274 aa]	HLA class I histocompatibility antigen :Q5S3G3_HUMAN
2	b		A 1 (A)	polymer(polypeptide(L)) [273 aa]	HLA class I histocompatibility antigen :Q5S3G3_HUMAN	201E (identity: 100.0 %/97.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8rhq_C_1 identity=97.4%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :******** ******************************************************************************** **********:
8rhq_C_1      25:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 124
SecStr          :  EEEEEEEEEE  STT   EEEEEEEETTEEEEEEETTSSS S EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEE:    
ExpBur          :eebbbbbebebebeeeeeebebebebebbebebbebebeeeeeebeeebebbeebeeebbeebbeebeeebeebeeebeebeeeeeeeeeeebebebbbb:    

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :**** ********************************************** *** **** * *************************************:
8rhq_C_1     125:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEE STHHHHHHHHHHHHTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS  B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeebeeeebbbebbbeeeebbebeeebeebebeeebbeebeeebeeeebbeebeebbeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :                                                                            b                       

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 298
                :**************************************************************************:
8rhq_C_1     225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 298
SecStr          :EEEEEEEEBSS  EEEEEETTEEE TTEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEE  :    
ExpBur          :bbbbbeebbbbebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebebbeeeeebee:

Protein Model on 8rhq_C_1_A_1 (TEMPLATE: 8rhq )

Input Residue Numbers for Focused Sites