[pdbjlvh2]Protein Model on 6nca_AB_1_J

Protein Model on 6nca_AB_1_J_1 (TEMPLATE: 6nca )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:10]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	AB 1 (R)	polymer(polypeptide(L)) [275 aa]	HLA class I histocompatibility antigen, A-2 alpha chain :1A02_HUMAN
2	b		J 1 (6)	polymer(polypeptide(L)) [9 aa]	Replication and transcription activator :RTA_EBVG	29M 31Y 87E 90N(K) 93A 94Q(H) 97T 101D 104T 105L 108Y 123Y 140D(Y) 147Y 167T 171W 176E(V) 179Q 180L 183Y 187T 191W 195Y (identity: 82.6 %/93.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6nca_AB_1 identity=93.1%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :************************************************************* *** *** *** ******************** * ***:
6nca_AB_1      1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100
SecStr          :  EEEEEEEEEE  SSSSS EEEEEEEETTEEEEEEETT SS S EE SHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TT   EEEEEEE:    
ExpBur          :eebbbbbebebebeeeeeebebebebebbebebbebbbebeeeebeeebebbeebeeebbebbbeebeeebeebeeebeebeeeeeeeeeeebebebbbb:    
Contact         :    b b                                                       b  b  bb  b   b  bb  b              b 

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :****** ****** * ********** ************** ** ****** ******** ********************** ********  ******:
6nca_AB_1    101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200
SecStr          :EEE TTSSEEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS  B  EEEEEEEESSSSEEE:    
ExpBur          :bbbbeeeeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeebeeeeebeebeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :               b      b                   b   b    b  bb  b   b   b   b                             

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
                :****** ********************************************* **********************:
6nca_AB_1    201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr          :EEEEEEEEBSS  EEEEEETTEEE SSEEE   EE SSS EEEEEEEEEETT TTTEEEEEE TT SS EEE   :    
ExpBur          :bbbebeebbbbebebbbbeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeee:

Protein Model on 6nca_AB_1_J_1 (TEMPLATE: 6nca )

Input Residue Numbers for Focused Sites