Protein Model on 8rhq_A_1_M_1 (TEMPLATE: 8rhq )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HLAA_HUMAN) A 1 (A) polymer(polypeptide(L)) [273 aa] HLA class I histocompatibility antigen :Q5S3G3_HUMAN
2 b M 1 (A) non-polymer(EDO) 1,2-ETHANEDIOL 109Y 146D 147Y 161D 163A 164A (identity: 100.0 %/96.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8rhq_A_1 identity=96.4%
queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :******** ******   *********************************************************************** **********:
8rhq_A_1      25:GSHSMRYFYTSVSRPXXXEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 124
SecStr          :  EEEEEEEEEE   ---  EEEEEEEETTEEEEEEESSSSS   EE STTTTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbbbebebebee---ebebebbbebbebebbebbbeeeeeebeeebebbeebeeebbeebbeebeeebeebeeebeebeeeeeeeeeeebebebbbb:    
Contact         :                                                                                    b               

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :**** ********************************************** *** **** * *************************************:
8rhq_A_1     125:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEE STHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeebeeeebebebbbeeeebbebeeebeebebbeebbeebeeeeeeeebbeebeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :                     bb             b bb                                                            

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEL: 300
                :****************************************************************************:
8rhq_A_1     225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEL: 300
SecStr          :EEEEEEEEBSS  EEEEEETTEEE TTEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEEE   :    
ExpBur          :bbbebeebbbbebebebeeeeeeeeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebebbeeeeebeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123