Protein Model on 6vr1_A_1_E_1
(TEMPLATE: 
6vr1
)Protein Model on 6vr1_A_1_E_1
(TEMPLATE: 6vr1
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAA_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [275 aa] | MHC class I antigen :Q861F7_HUMAN | |
| 2 | b | E 1 (P) | polymer(polypeptide(L)) [9 aa] | Cellular tumor antigen p53 peptide :P53_HUMAN | 31Y 69M 87E 89R 90N(K) 91V 93A 94Q(H) 96Q 97T 100V 101D 104T 108Y 121I(R) 123Y 140D(Y) 167T 170K 171W 174A 176E(V) 179Q 180L 183Y 187T 191W 195Y (identity: 82.1 %/93.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6vr1_A_1 identity=93.1% |
queryA 25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
:************************************************************* *** *** *** ******************** * ***:
6vr1_A_1 2:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 101
SecStr : EEEEEEEEEE TTS S EEEEEEEETTEEEEEEETTSSS S EE SGGGGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT SSS EEEEEEE:
ExpBur :eebbbbbebebebeeeeeebebebbbebbebebbebbeeeeeeebeeebebbeebeeebbebbbeebeebbeebeeebeebeeeeeeeeeeebebebbbb:
Contact : b b b bbb bb bb bb b b b b
queryA 125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
:****** ****** * ********** ************** ** ****** ******** ********************** ******** ******:
6vr1_A_1 102:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 201
SecStr :EEE TT EEEEEEEEEETTEEEEEE TTSS EEESSSTHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEESSSSEEE:
ExpBur :bbbbeeeeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeeeeeeeebeebeeebebebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:
Contact : b b bb b b bb b b b b
queryA 225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
:****** ********************************************* **********************:
6vr1_A_1 202:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 276
SecStr :EEEEEEEEBSS EEEEEETTEE TTEEE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEEE :
ExpBur :bebebeebbbbebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeee:
|
[assembly_id:1]
[help]