[pdbjlvh2]Protein Model on 6vm8_A_1_E

Protein Model on 6vm8_A_1_E_1 (TEMPLATE: 6vm8 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [275 aa]	MHC class I antigen, A-2 alpha chain :A0A5B8RNS7_HUMAN
2	b		E 1 (C)	polymer(polypeptide(L)) [9 aa]	Melanocyte protein PMEL :PMEL_HUMAN	29M 31Y 69M 83Y 87E 90N(K) 91V 93A 94Q(H) 97T 101D 104T 105L 108Y 121I(R) 123Y 140D(Y) 167T 170K 171W 174A 176E(V) 180L 183Y 187T 191W 195Y (identity: 81.5 %/93.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6vm8_A_1 identity=93.1%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :************************************************************* *** *** *** ******************** * ***:
6vm8_A_1       1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100
SecStr          :  EEEEEEEEEE  TTTSS EEEEEEEETTEEEEEEETTSSS S EE SGGGGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeebebebbbebbebebbebbeeeeeeebeeebebbeebeeebbeebbeebeeeeeebeebbeebeeeeeeeeeeebebebbbb:    
Contact         :    b b                                     b             b   b  bb bb  b   b  bb  b            b b 

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :****** ****** * ********** ************** ** ****** ******** ********************** ********  ******:
6vm8_A_1     101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS  B  EEEEEEEESSSSEEE:    
ExpBur          :bbbbeeeeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeebeeeeebeeebeebeeebbeebeebbeebeeebeeebebeeebeeeeeeeeebb:    
Contact         :               b                          b  bb  b b   b  b   b   b   b                             

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
                :****** ********************************************* **********************:
6vm8_A_1     201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr          :EEEEEEEEBSS  EEEEEETTEEE TTEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEEE  :    
ExpBur          :bbbbbeebbbbebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebebbeeeeebeee:

Protein Model on 6vm8_A_1_E_1 (TEMPLATE: 6vm8 )

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