Protein Model on 7zuc_A_1_C_1 (TEMPLATE: 7zuc )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HLAA_HUMAN) A 1 (A) polymer(polypeptide(L)) [276 aa] MHC class I antigen :A0A5B8RNS7_HUMAN
2 b C 1 (C) polymer(polypeptide(L)) [9 aa] LEU-LEU-LEU-GLY-ILE-GLY-ILE-LEU-VAL 29M 31Y 33F 69M 83Y 87E 90N(K) 91V 94Q(H) 97T 100V 101D 104T 105L 108Y 121I(R) 123Y 138R(H) 140D(Y) 167T 170K 171W 176E(V) 179Q 180L 183Y 187T 191W 195Y (identity: 79.3 %/93.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7zuc_A_1 identity=93.1%
queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :************************************************************* *** *** *** ******************** * ***:
7zuc_A_1       1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100
SecStr          :  EEEEEEEEEEE SSSS  EEEEEEEETTEEEEEEEGGGT  S EESSHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS EEEEEEEE:    
ExpBur          :eebbbbbebebbbeeeeeebebbbbbebbebebbbbbeeeebeebeeebebbeebeeebbebbbeebeebbeebeeebeebeeeeeeeeeeebebebbbb:    
Contact         :    b b b                                   b             b   b  bb  b  b  bb  bb  b            b b 

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :****** ****** * ********** ************** ** ****** ******** ********************** ********  ******:
7zuc_A_1     101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200
SecStr          :EEE TTSSEEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEESSSSEEE:    
ExpBur          :bbbbeebeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeebeeeeebeebeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :             b b                          b  bb    b  bb  b   b   b   b                             

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
                :****** ********************************************* **********************:
7zuc_A_1     201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr          :EEEEEEEEBSS  EEEEEETTEEE TTEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEEE  :    
ExpBur          :bbbbbeebbbbebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123