CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAA_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [275 aa] | MHC class I antigen :Q861F7_HUMAN | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [9 aa] | Spike protein S1 :SPIKE_SARS2 | 29M 31Y 33F 69M 87E 90N(K) 91V 94Q(H) 97T 100V 101D 104T 105L 108Y 121I(R) 123Y 138R(H) 140D(Y) 147Y 167T 170K 171W 176E(V) 179Q 180L 183Y 187T 191W 195Y (identity: 79.3 %/93.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7n6d_A_1 identity=93.1% |
queryA 25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124 :************************************************************* *** *** *** ******************** * ***: 7n6d_A_1 1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100 SecStr : EEEEEEEEEE STTS EEEEEEEETTEEEEEEESSS S EE SHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE: ExpBur :eebbbbbebebbbeeeeeeeebbbbbebbebebbebbeeeeeeebeeebebbeebeeebbebbbeebeebbeebeeebeebeeeeeeeeeeebebebbbb: Contact : b b b b b bb b b bb bb b b b queryA 125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224 :****** ****** * ********** ************** ** ****** ******** ********************** ******** ******: 7n6d_A_1 101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200 SecStr :EEE TT EEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS B EEEEEEEESSSSEEE: ExpBur :bbbbeeebeeebebebbbeeeebbebeeebeebeeeeebbeebeeebeeeebbeeeeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb: Contact : b b b b bb b bb b b b b queryA 225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299 :****** ********************************************* **********************: 7n6d_A_1 201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 275 SecStr :EEEEEEEEBSS EEEEEETTEEE TTEEE EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEEE : ExpBur :bebbbeebbbbebebebbeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebebbeeeeebeee: |