[pdbjlvh2]Protein Model on 7m8t_A_1_C

Protein Model on 7m8t_A_1_C_1 (TEMPLATE: 7m8t )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [276 aa]	HLA class I histocompatibility antigen, A alpha chain :U5YJK1_HUMAN
2	b		C 1 (C)	polymer(polypeptide(L)) [9 aa]	Spike protein S1 peptide :SPIKE_SARS2	29M 31Y 33F(Y) 87E 90N 94Q 97T 100V 101D 104T 105L 108Y 119I 123Y 140D 167T 170K 171W 174A 176E(A) 179Q 183Y 187T(R) 191W 195Y (identity: 88.0 %/97.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7m8t_A_1 identity=97.5%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :******** ******************************************************************************** **********:
7m8t_A_1       1:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 100
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS S EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeebebebbbebbeeebbebebeeeeeebeeebebbeebeeebbeebbeebeebeeebeeebeebeeeeeeeeeeebebebebb:    
Contact         :    b b b                                                     b  b   b  b  bb  bb  b          b   b 

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :**** ********************************************** *** **** * *************************************:
7m8t_A_1     101:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeebeeeebbbebbbeeeebbbbeeebeebeeeeebbeebeeeeeeeebbeebeebbebebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :               b                          b  bb  b b  b   b   b   b   b                             

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEL: 300
                :****************************************************************************:
7m8t_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEL: 276
SecStr          :EEEEEEEEBSS  EEEEEETTEE  TTEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE S  :    
ExpBur          :bbbbbebbbbbebebebbeeeeebeeeeeebeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeee:

Protein Model on 7m8t_A_1_C_1 (TEMPLATE: 7m8t )

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