[pdbjlvh2]Protein Model on 6j2a_A_1_C

Protein Model on 6j2a_A_1_C_1 (TEMPLATE: 6j2a )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [274 aa]	HLA-A*3003
2	b		C 1 (C)	polymer(polypeptide(L)) [9 aa]	NP44	29M 31Y 69M 86Q 87E 90N 94Q(H) 97T 100V(E) 101D(N) 104T 105L 108Y 119I 121I 123Y 138R(E) 140D(H) 147Y 167T 170K 171W 176E(R) 180L 183Y 187T 191W 195Y (identity: 78.6 %/96.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6j2a_A_1 identity=96.0%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :******** ******* **************************************************** *****  ***********************:
6j2a_A_1       1:GSHSMRYFSTSVSRPGSGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAHSQTDRENLGTLRGYYNQSEAGSHTIQIMYG: 100
SecStr          :  EEEEEEEEEE  TTTS  EEEEEEEETTEEEEEEETTSSS S EE SGGGTT  HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEE:    
ExpBur          :eebebbbebebebeeeeeebebebebebbebebbebbeebeeeebbeebebbeebeeebbeebbeebeebbeebeeebeebeeeeeeeeeeebebebbeb:    
Contact         :    b b                                     b                bb  b   b  b  bb  bb  b          b b b 

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :************* * *************************** ******  ******** ***************************************:
6j2a_A_1     101:CDVGSDGRFLRGYEQHAYDGKDYIALNEDLRSWTAADMAAQITQRKWEAARRAEQLRAYLEGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeebeeeebebebbbeeeebbbbeeebeebeeeeebbeebbeebeeeeebeebbeebeeebbeebeebbeebeeebeeeeebeeebebeeeeeeebb:    
Contact         :             b b      b                   b  bb    b   b  b   b   b   b                             

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 298
                :**************************************************************************:
6j2a_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 274
SecStr          :EEEEEEEEBSS  EEEEEETTEEE TTEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE  :    
ExpBur          :bebbbeebbbbebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebee:

Protein Model on 6j2a_A_1_C_1 (TEMPLATE: 6j2a )

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