[pdbjlvh2]Protein Model on 3rl2_A_1_C

Protein Model on 3rl2_A_1_C_1 (TEMPLATE: 3rl2 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [274 aa]	HLA class I histocompatibility antigen, A-3 alpha chain :1A03_HUMAN
2	b		C 1 (C)	polymer(polypeptide(L)) [10 aa]	Nef73 peptide from Protein Nef :Q9YYU8_9HIV1	31Y 86Q 87E 90N 93A 94Q 97T 100V 101D 104T 108Y 119I 123Y 138R 140D 167T 170K 171W 176E 179Q 183Y 187T 191W 195Y (identity: 100.0 %/100.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3rl2_A_1 identity=100.0%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :****************************************************************************************************:
3rl2_A_1       1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 100
SecStr          :  EEEEEEEEEE  TTS S EEEEEEEETTEEEEEEETTSSS S EE STTTTT  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT  TTS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeebebebbbebbeeebbebeeeeeeeebeeebebbeebeeebbeebbeebeebbeebeeebeebeeeeeeeeeeebebebbbb:    
Contact         :      b                                                      bb  b  bb  b  bb  b   b          b   b 

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :****************************************************************************************************:
3rl2_A_1     101:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEESSSEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTTTTS   B  EEEEEEEESSSS EE:    
ExpBur          :bbbbeebeeeebbbebbbeeeebbebeeebeebebeeebbeebeeeeeeeeebeebbeebebebbeebeebbeebeeebbeeeebeeebeeeeeeeeebb:    
Contact         :             b b                          b  bb    b  b   b   b   b   b                             

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 298
                :**************************************************************************:
3rl2_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 274
SecStr          :EEEEEEEEBSS  EEEEEESSS EE SEEE   EE SSS EEEEEEEEE SS STTEEEEEE TTSSS EEE  :    
ExpBur          :bbbebeebbeeebebebbeeeeeebeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebee:

Protein Model on 3rl2_A_1_C_1 (TEMPLATE: 3rl2 )

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