[pdbjlvh2]Protein Model on 1qvo_A_1_C

Protein Model on 1qvo_A_1_C_1 (TEMPLATE: 1qvo )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [275 aa]	HLA class I histocompatibility antigen, A-11 alpha chain :1A11_HUMAN
2	b		C 1 (C)	polymer(polypeptide(L)) [10 aa]	Negative factor :NEF_HV1Z6	31Y 33F(Y) 86Q 87E 90N 93A 94Q 96Q 97T 100V 101D 104T 108Y 119I 123Y 138R 140D 157W 167T 170K 171W 174A 179Q 180L(Q) 183Y 187T(R) 191W 195Y (identity: 89.3 %/97.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1qvo_A_1 identity=97.5%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :******** ******************************************************************************** **********:
1qvo_A_1       1:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 100
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS S EE SGGGGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbbbebebebeeeeeebebebbbebbebebbbbbeeeeeeebeeebebbeebeeebbeebbeebeebeeebeeebeebeeeeeeeeeeebebebbbb:    
Contact         :      b b                                                    bb  b  bb bb  bb  b   b          b   b 

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :**** ********************************************** *** **** * *************************************:
1qvo_A_1     101:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS  B  EEEEEEEESSSSEEE:    
ExpBur          :bbbbeebeeeebebebbbeeeebbbbeeebeebebeeebbeebeeeeeeeebbeebeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :             b b                b         b  bb  b    bb  b   b   b   b                             

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
                :***************************************************************************:
1qvo_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr          :EEEEEEEEBSS  EEEEEETTEE TTTEEE   EE SSS EEEEEEEEEETT GGGEEEEEE SSSSS EEEE  :    
ExpBur          :bbbbbebbbbbebebbbeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeeeeee:

Protein Model on 1qvo_A_1_C_1 (TEMPLATE: 1qvo )

Input Residue Numbers for Focused Sites