Protein Model on 1akj_A_1_C_1
(TEMPLATE: 
1akj
)Protein Model on 1akj_A_1_C_1
(TEMPLATE: 1akj
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAA_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [276 aa] | MHC CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-A*0201) (ALPHA CHAIN) :1A02_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [9 aa] | HIV REVERSE TRANSCRIPTASE EPITOPE | 31Y 33F 69M 83Y 87E 89R 90N(K) 91V 94Q(H) 97T 101D 104T 105L 108Y 121I(R) 123Y 140D(Y) 167T 170K 171W 176E(V) 179Q 180L 183Y 187T 191W 195Y (identity: 81.5 %/93.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1akj_A_1 identity=93.1% |
queryA 25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
:************************************************************* *** *** *** ******************** * ***:
1akj_A_1 1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100
SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETTSTT S EE SHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT S S EEEEEEE:
ExpBur :eebbbebebebebeeeeeebebebebebbebebbebbbeeeeeebbeebebbeebeeebbebbbeebeeebeebeeebeebeeeeeeeeeeebebebbbb:
Contact : b b b b b bbb b b b bb b b b
queryA 125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
:****** ****** * ********** ************** ** ****** ******** ********************** ******** ******:
1akj_A_1 101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200
SecStr :EEE TT EEEEEEEEEETTEEEEEE TTSS EE SSHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS B EEEEEEEEEETTEEE:
ExpBur :bbbbeeeeeeebbbebbbeeeebbbbeeebeebebeeebbeebbeebeeeeebeebbeebeeebbeebeebbeebeeebeeeeebeeeeeeeeeeeeebb:
Contact : b b bb b bb b b b b
queryA 225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
:****** ********************************************* **********************:
1akj_A_1 201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr :EEEEEEEEBSS EEEEEEETTEE TTS EE EE SSS EEEEEEEEEETT GGGEEEEEEETT SS EEEES :
ExpBur :bbbbbeebbbbebebbbbeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeeeeee:
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[assembly_id:1]
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