[pdbjlvh2]Protein Model on 8eb2_A_1_B

Protein Model on 8eb2_A_1_B_1 (TEMPLATE: 8eb2 )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [275 aa]	HLA-A*02:01 alpha chain :Q53Z42_HUMAN
2	b		B 1 (B)	polymer(polypeptide(L)) [100 aa]	Beta-2-microglobulin :B2MG_HUMAN	32F 33F 34T 36V 49V 51Y 56Q 59R 72R 118T 120Q 121I(R) 139Q 140D(Y) 141A 143D 144G 146D 214T 226R 228W 255V 256E 258R 259P 260A 261G 266Q 268W (identity: 93.1 %/93.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8eb2_A_1 identity=93.1%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :************************************************************* *** *** *** ******************** * ***:
8eb2_A_1       1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100
SecStr          :  EEEEEEEEEE  TTTSS EEEEEEEETTEEEEEEETTSSS S EE SGGGGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeeeebebebebbebebbbbbbeeeeeebeeebebbeebeeebbebbbeebeeeeeebeebbeebeeeeeeeeeeebebebbbb:    
Contact         :       bbb b            b b    b  b            b                                             b bb   

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :****** ****** * ********** ************** ** ****** ******** ********************** ********  ******:
8eb2_A_1     101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200
SecStr          :EEE TT  EEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeeeeeeebbbebbbeeeebbebeeebeebebeeebbeebeeebeeeeebeebbeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :              bbb bb b                                                                   b          

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
                :****** ********************************************* **********************:
8eb2_A_1     201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr          :EEEEEEEEBSS  EEEEEETTEE  SSEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEEE  :    
ExpBur          :bebbbeebbbbebebbbeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebebbeeeeebeee:    
Contact         : b b                          bb bbbb    b b

Protein Model on 8eb2_A_1_B_1 (TEMPLATE: 8eb2 )

Input Residue Numbers for Focused Sites