Protein Model on 7wkj_A_1_B_1 (TEMPLATE: 7wkj )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HLAA_HUMAN) A 1 (A) polymer(polypeptide(L)) [274 aa] MHC class I antigen :A0A6M6CC39_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [99 aa] Beta-2-microglobulin :B2MG_HUMAN 32F 33F(Y) 34T 36V 49V 51Y 56Q 59R 72R 120Q 121I 122M 139Q 140D 141A 144G 145K 146D 214T 216H 226R 228W 230L 255V 256E 258R 259P 260A 261G 262D 266Q 268W (identity: 96.9 %/97.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7wkj_A_1 identity=97.4%
queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :******** ******************************************************************************** **********:
7wkj_A_1       1:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 100
SecStr          :  EEEEEEEEEE  SSSSS EEEEEEEETTEEEEEEETTSSS S EE SGGGGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeebebebbbebbeeebbebbbeeeeeebeeebebbeebeeebbeebbeebeeebeebeeebeebeeeeeeeeeeebebebbbb:    
Contact         :       bbb b            b b    b  b            b                                               bbb  

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :**** ********************************************** *** **** * *************************************:
7wkj_A_1     101:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHH SSSS   B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeeeeeeebebebbbeeeebbebeeebeebeeeeebbeebeeeeeeeebbeebbeebeeebbebbeebeebbeeebbeeeebeeebeeeeeeeeebb:    
Contact         :              bbb  bbb                                                                   b b        

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 298
                :**************************************************************************:
7wkj_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 274
SecStr          :EEEEEEEEBSS  EEEEEETTEEE TTEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE  :    
ExpBur          :bbbbbeebbbbebebbbeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeebee:    
Contact         : b b b                        bb bbbbb   b b                                                        


Input Residue Numbers for Focused Sites

ex) 2,15,123