Protein Model on 7uc5_A_1_B_1 (TEMPLATE: 7uc5 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HLAA_HUMAN) A 1 (A) polymer(polypeptide(L)) [277 aa] HLA class I histocompatibility antigen, A alpha chain :HLAA_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [99 aa] Beta-2-microglobulin :B2MG_HUMAN 32F 33F 34T 36V 47I 49V 51Y 56Q 59R 72R 118T 120Q 121I 139Q 140D 141A 143D 144G 145K 146D 216H 226R 228W 255V 256E 257T 258R 259P 260A 261G 266Q 268W (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7uc5_A_1 identity=100.0%
queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :****************************************************************************************************:
7uc5_A_1       1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 100
SecStr          :  EEEEEEEEEE  TTS S EEEEEEEETTEEEEEEETTSSS S EE SGGGTT  HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeebebebbbebbeeebbbbbbebeeeebeeebebbeeeeeebbeebbeebeebbeebbeebeebeeeeeeeeeeebebebbbb:    
Contact         :       bbb b          b b b    b  b            b                                             b bb   

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :****************************************************************************************************:
7uc5_A_1     101:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHHTHHHHHHHHHTTHHHHHHHHHHHHTTTTS   B  EEEEEEEESSSSEEE:    
ExpBur          :bbbbeeeeeeebbbebbbeeeebbebeeebeebebeeebbeebbeebeeeeebeebeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :              bbb bbbb                                                                     b        

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWELS: 301
                :*****************************************************************************:
7uc5_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWELS: 277
SecStr          :EEEEEEEEBSS  EEEEEETTEE TTT EE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE     :    
ExpBur          :bebbbeebbbeebebebbeeeeebeeeeeebeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeeeee:    
Contact         : b b                          bbbbbbb    b b                                                        


Input Residue Numbers for Focused Sites

ex) 2,15,123