Protein Model on 5c08_A_1_B_1
(TEMPLATE: 
5c08
)Protein Model on 5c08_A_1_B_1
(TEMPLATE: 5c08
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAA_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [276 aa] | HLA class I histocompatibility antigen, A-2 alpha chain :1A02_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [100 aa] | Beta-2-microglobulin :B2MG_HUMAN | 32F 33F 34T 36V 47I 49V 51Y 56Q 59R 72R 111Q 120Q 121I(R) 122M 139Q 140D(Y) 141A 143D 144G 146D 216H 226R 228W 256E 258R 259P 260A 261G 262D 266Q 268W (identity: 93.5 %/93.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5c08_A_1 identity=93.1% |
queryA 25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
:************************************************************* *** *** *** ******************** * ***:
5c08_A_1 1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100
SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETTSSS S EE STTTTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE:
ExpBur :eebbbebebebebeeeeeebebebbbebbebebbebbbeeeeeebbeebebbeebeeebbeebbeebeebbeebeebbeebeeeeeeeeeeebebebbbb:
Contact : bbb b b b b b b b b bbb
queryA 125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
:****** ****** * ********** ************** ** ****** ******** ********************** ******** ******:
5c08_A_1 101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200
SecStr :EEE TT EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEE SSSEEE:
ExpBur :bbbbeeeeeeebbbebbbeeeebbbbeeebeebebeeebbeebbeebeeeeebeebbeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:
Contact : bbb bb b b
queryA 225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
:****** ********************************************* **********************:
5c08_A_1 201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr :EEEEEEEEBSS EEEEEETTEE TTEEE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE :
ExpBur :bebbbeebbbbebebebeeeeeeeeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebebbeeeeebeee:
Contact : b b b bbbbb b b
|
[assembly_id:1]
[help]