Protein Model on 7n9f_YA_7_ZA_7
(TEMPLATE: 
7n9f
)Protein Model on 7n9f_YA_7_ZA_7
(TEMPLATE: 7n9f
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(NUP98_HUMAN) | YA 7 (c) | polymer(polypeptide(L)) [559 aa] | Nucleoporin 145c :NU145_YEAST | |
| 2 | b | ZA 7 (d) | polymer(polypeptide(L)) [274 aa] | Protein transport protein SEC13 :SEC13_YEAST | 1500S(K) 1513R 1514S(Q) 1543Q(E) 1546G(D) 1547V(E) 1550A(F) 1551S(A) 1557E 1558S(F) 1574N(D) 1576G(K) 1577I(A) 1580K(D) 1581A(T) 1583R(K) 1584E(R) 1585L 1587T(M) 1588R 1622V(L) 1623R(K) 1625H(R) 1626M(Y) 1627E 1628S(G) 1630K(Y) 1645R(L) 1646C(A) 1648K(M) 1649L(A) 1652R(T) 1677P(S) 1678E 1679R 1680S(D) (identity: 19.4 %/24.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7n9f_YA_7 identity=24.9% |
queryA 1301:ERRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQS--VRELLTMQLVDWHQLQADSFIQDERLRI:1398
:** * * *** * * ** * ** * * * * ** * * ** * * *:
7n9f_YA_7 264:ERHCRLTSWIVSQIGPEIEEKIR--NSSNEIEQIFLYLLLNDVVRASKLAIESKNGHLSVLIS-YLGSNDPRIRDLAELQLQKWST--GGCSIDKNISKI: 358
SecStr :HHHHHHHHHHHHTTHHHHHHHHT--T SHHHHHHHHHHTT HHHHTTTTTTTT SSSSSS - SS SHHHHHHHHHHHHH S--SSS TTHHHH:
ExpBur :bbbeebbebbeeebbeebeebbe--ebeeebbbbbbbbbeeeeeebeeebeeeeeeebbebbe-beeebeeebbeebeeebeebee--eeeeeeebebbb:
queryA 1399:FALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKL:1498
: ** * * * * * * * * * * * * * * * **:
7n9f_YA_7 359:YKLLSGSPFEGLFSLKELE--SEFSWLCLLNLTLCYGQIDEYSLESLVQSHLDKFSLPYDD------PIGVIFQ----LYAANENTE-----------KL: 435
SecStr :HHHTTTSSSSSSS SSS --SSS HHHHHHHHHHSS SSSS HHHHHHHHHHH TTS------TTHHHHH----HHH SSTHH-----------HH:
ExpBur :bbbbbebbbeeebbbeeee--ebbebbbbbbbbbbbbbbeeeebeebbeebbeebebeeee------bbbbbbb----bbbbeeebe-----------eb:
queryA 1499:YSDRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPES:1598
:* * * * ** * * ** * * *** * ** * * * ** :
7n9f_YA_7 436:YK----------EVRQRT-NALDVQFCWYLIQTLRFNGTRVFSKETSDEATFAFAAQLEFAQLHGHSLFVSCFLNDDKAAEDTIKRLVMREITLLRA---: 521
SecStr :HH----------HHTTS - SS HHHHHHHHHHHHHHTSS HHHHHHHHHHHHHHHTTTT HHHHHHHTTSS TTHHHHHHHHHHHH SSSSSS---:
ExpBur :be----------ebeeee-ebbebbbbbbbbbbbbeeeebebeeebbeebbebbbebbbbbbebbbbbbbbbbbeeeebbeeebbebbbebbebbee---:
Contact : b bb b bb bb bb b bb bb bbb bb
queryA 1599:WAKETFLTQKLRVPAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRH------LASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLV:1692
: * * * * * * * * * * * * * ** * * *:
7n9f_YA_7 522:-STNDHILNRLKIPSQLIFNAQALKDRYEGNYLSEVQNLLLGSSYDLAEMAIVTSLGPRLLLSNNPVQNNELKTLREILNEFPDSERDK----WSVSINV: 616
SecStr :-SSSTTTSS SS HHHHHHHHHHS STTHHHHHHHHHTT SS SSSSHHHHSS S TTHHHHHHHHTTTTTTS TT ---- SSSSTH:
ExpBur :-eebbeebbebebeeebbebbebeeeeeeeebeeebeebbebeebeeebbbbbbbbbeebebeeeeebbeebbebbebbeebeeeeeeb----eeebbbb:
Contact : bb bbbb b bb bb b bb b bbbb
queryA 1693:YLDYIRVI:1700
: * :
7n9f_YA_7 617:FEVYLKLV: 624
SecStr :HHHGGGSS:
ExpBur :bbebbebe:
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[assembly_id:1]
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