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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NUP98_HUMAN) | YA 5 (c) | polymer(polypeptide(L)) [559 aa] | Nucleoporin 145c :NU145_YEAST | |
2 | b | ZA 5 (d) | polymer(polypeptide(L)) [274 aa] | Protein transport protein SEC13 :SEC13_YEAST | 1500S(K) 1513R 1514S(Q) 1543Q(E) 1546G(D) 1547V(E) 1550A(F) 1551S(A) 1557E 1558S(F) 1574N(D) 1576G(K) 1577I(A) 1580K(D) 1581A(T) 1583R(K) 1584E(R) 1585L 1587T(M) 1588R 1622V(L) 1623R(K) 1625H(R) 1626M(Y) 1627E 1628S(G) 1630K(Y) 1645R(L) 1646C(A) 1648K(M) 1649L(A) 1652R(T) 1677P(S) 1678E 1679R 1680S(D) (identity: 19.4 %/24.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7n9f_YA_5 identity=24.9% |
queryA 1301:ERRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQS--VRELLTMQLVDWHQLQADSFIQDERLRI:1398 :** * * *** * * ** * ** * * * * ** * * ** * * *: 7n9f_YA_5 264:ERHCRLTSWIVSQIGPEIEEKIR--NSSNEIEQIFLYLLLNDVVRASKLAIESKNGHLSVLIS-YLGSNDPRIRDLAELQLQKWST--GGCSIDKNISKI: 358 SecStr :HHHHHHHHHHHHTTHHHHHHHHT--T SHHHHHHHHHHTT HHHHTTTTTTTT SSSSSS - SS SHHHHHHHHHHHHH S--SSS TTHHHH: ExpBur :bbbeebbebbeeebbeebeebbe--ebeeebbbbbbbbbeeeeeebeeebeeeeeeebbebbe-beeebeeebbeebeeebeebee--eeeeeeebebbb: queryA 1399:FALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKL:1498 : ** * * * * * * * * * * * * * * * **: 7n9f_YA_5 359:YKLLSGSPFEGLFSLKELE--SEFSWLCLLNLTLCYGQIDEYSLESLVQSHLDKFSLPYDD------PIGVIFQ----LYAANENTE-----------KL: 435 SecStr :HHHTTTSSSSSSS SSS --SSS HHHHHHHHHHSS SSSS HHHHHHHHHHH TTS------TTHHHHH----HHH SSTHH-----------HH: ExpBur :bbbbbebbbeeebbbeeee--ebbebbbbbbbbbbbbbbeeeebeebbeebbeebebeeee------bbbbbbb----bbbbeeebe-----------eb: queryA 1499:YSDRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPES:1598 :* * * * ** * * ** * * *** * ** * * * ** : 7n9f_YA_5 436:YK----------EVRQRT-NALDVQFCWYLIQTLRFNGTRVFSKETSDEATFAFAAQLEFAQLHGHSLFVSCFLNDDKAAEDTIKRLVMREITLLRA---: 521 SecStr :HH----------HHTTS - SS HHHHHHHHHHHHHHTSS HHHHHHHHHHHHHHHTTTT HHHHHHHTTSS TTHHHHHHHHHHHH SSSSSS---: ExpBur :be----------ebeeee-ebbebbbbbbbbbbbbeeeebebeeebbeebbebbbebbbbbbebbbbbbbbbbbeeeebbeeebbebbbebbebbee---: Contact : b bb b bb bb bb b bb bb bbb bb queryA 1599:WAKETFLTQKLRVPAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRH------LASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLV:1692 : * * * * * * * * * * * * * ** * * *: 7n9f_YA_5 522:-STNDHILNRLKIPSQLIFNAQALKDRYEGNYLSEVQNLLLGSSYDLAEMAIVTSLGPRLLLSNNPVQNNELKTLREILNEFPDSERDK----WSVSINV: 616 SecStr :-SSSTTTSS SS HHHHHHHHHHS STTHHHHHHHHHTT SS SSSSHHHHSS S TTHHHHHHHHTTTTTTS TT ---- SSSSTH: ExpBur :-eebbeebbebebeeebbebbebeeeeeeeebeeebeebbebeebeeebbbbbbbbbeebebeeeeebbeebbebbebbeebeeeeeeb----eeebbbb: Contact : bb bbbb b bb bb b bb b bbbb queryA 1693:YLDYIRVI:1700 : * : 7n9f_YA_5 617:FEVYLKLV: 624 SecStr :HHHGGGSS: ExpBur :bbebbebe: |